Streptococcus oriscaviae: INT76_08280
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Entry
INT76_08280 CDS
T08170
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sos
Streptococcus oriscaviae
Pathway
sos03030
DNA replication
sos03430
Mismatch repair
sos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
INT76_08280
03430 Mismatch repair
INT76_08280
03440 Homologous recombination
INT76_08280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sos03032
]
INT76_08280
03400 DNA repair and recombination proteins [BR:
sos03400
]
INT76_08280
Enzymes [BR:
sos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
INT76_08280
DNA replication proteins [BR:
sos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
INT76_08280
DNA repair and recombination proteins [BR:
sos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
INT76_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
DEDDh_C
B
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QUE53817
LinkDB
All DBs
Position
1626316..1630710
Genome browser
AA seq
1464 aa
AA seq
DB search
MTDTFQLLLQQIGMPLDPEGTSVFSSGQIEEVIVHRRSKVWEFTFRFARPLPLVDYQHFK
ARLANEFQKTGNQARFRLVTDATDLDKELVEAYYPEAFTEELCQSVGFKALFQGLEVSYR
DGILWIKGPETIDTVHFRKNHLPNLVEQYGRFGFANLKVDIEVCQDMTASQEEAFHAQNE
EIYQKANEENLAALEQLSQMAPPPEAAQPSFQDFKKTRQPKVSLDKSEVTQMIDVTTEEN
RIVFEGLVFDVEQKTTKTGRIIINFKMTDYSSSFTLQKWAKNEEEAQKFDMVKKGNWLRV
RGNVETNHFTKDLTMNVQEVQEVKKDIRKDLMPEGEKRVEFHAHTNMSTMDALPPVEDLI
ARAAKWGHKAIAITDHGNVQSFPHGYHAAKKAGIKAIFGLEANIVEDSVPIVYNEKDTDL
SDATYVVFDVETTGLSAVYNDLIQIAASKMHKGNIIAEFDEFIDPGHPLSQFTTDLTGIT
DEHVRGSKPLEQVLKEFQEFCQDAILVAHNASFDVGFMNVNYERAGLPTISQPVIDTLEF
ARNLYPEYKRHGLGPLTKRFGVALEHHHMANYDAEATGRLLFIFLKDALEKHNLTNLTQL
NTDLIAEDSYKKARVKHATLYVTNQVGLKNIFKLVSLSNTKYFEGVPRIPRTVLNEHREG
LILGTACQEGEVFDELLSKGIEDAVKVASYYDFIEVMPPALYAPMIAKEQFQNMAEIEEL
IKKLIEVGRRANLPVLATGNVHYIDPEEEIYREIIVRALGQGAMINRPIGQGENAQPAPL
PKAHFRTTNEMLDEFAFLGDDLAREIVISNPNAMLDRFEDVEVVKKDLYTPYIEKAEETV
AELTYQKAFEIYGNPLPDIIDLRIEKELSSILGNGFAVIYLASQMLVTRSNERGYLVGSR
GSVGSSFVATMIGITEVNPMPPHYVCPNCQHSEFITDGTYGSGFDMPDKACPQCGTTYNK
DGQDIPFETFLGFDGDKVPDIDLNFSGDDQPAAHLDVRKIFGEEYAFRAGTVGTVAAKTA
YGFVRGYERDYGKFYRDVEVERLAAGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPA
DDVTASWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPQTIPADDKGVMALF
SGTEILGVTPEQIGTPTGMLGIPEFGTNFVRGMVEETHPTTFSELLQLSGLSHGTDVWLG
NAQDLIRQGIADLSTVIGCRDDIMVYLMHAGLPPKMAFNIMERVRKGAWLKISEEERNGY
IQAMKDNNVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRAK
AFDLATMSGGLDKVKAKMEEISLKRKNNEASNVEVDLFTTLELVNEMLERGFKFGKLDLY
KSHATEFLIEENDTLIPPFVAMDGLGENVAKQLVAARAEGEFLSKTELRKRGGLSSTLVE
KMDEMGILGKMPEDNQLSLFDDLF
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacctttcaactcttacttcagcagattggaatgccgcttgatccagaagga
acaagtgttttttccagtggtcagattgaagaagtgatcgtgcatcgtcgcagcaaggtc
tgggaatttaccttccgctttgctcggcctctgcctctagtagattaccaacactttaag
gctcgtctggccaatgaatttcaaaagactggcaatcaggctcgttttcgtttggtgaca
gatgcaactgaccttgataaggaattggttgaggcctactatcctgaagcttttacagag
gaactttgccaaagcgtgggctttaaagctctttttcaaggtttggaggttagctaccga
gatggaatcttatggattaaagggcctgaaaccatagacaccgttcattttcgcaagaat
catctgccaaatctggtggaacagtacggtcgctttggttttgccaatcttaaggtggac
attgaggtctgtcaggacatgacagccagtcaggaagaagcctttcatgcccagaacgag
gaaatttaccagaaggccaatgaggaaaatctagcagccttggaacaattgtctcagatg
gctcctccaccagaagcagctcagccttccttccaagactttaaaaagacacgccagccc
aaggtcagtcttgataaatctgaagtgactcagatgattgatgtgacgacagaagaaaac
cgcattgtctttgaggggctggtctttgacgttgagcaaaaaacgaccaagactggacgg
attatcatcaactttaagatgacggactattcatcctcctttacccttcaaaagtgggcc
aaaaacgaagaagaagctcagaagtttgatatggtcaaaaaaggcaactggcttcgtgtg
cgtggtaatgtggaaaccaatcattttaccaaagatttgacgatgaatgttcaggaagtc
caagaggtcaaaaaggatattcgtaaggacctgatgccagaaggtgagaagcgggttgaa
tttcacgctcataccaatatgtccaccatggacgcccttcctccggttgaggatctgatt
gcccgggcagccaagtgggggcataaggctatcgccatcaccgaccacggcaatgtccaa
tccttccctcatggttaccatgcggcgaaaaaggctggcatcaaggccatctttgggctg
gaagccaatatcgtggaagacagtgtgcctattgtatacaacgaaaaagatacagactta
tcagatgcgacctatgtggttttcgacgtggaaacaacaggtttgtctgcagtctacaat
gatttgattcagattgcggcctccaaaatgcacaagggcaatatcattgctgaatttgat
gagtttattgatccgggccatcccttgagccagtttaccacagacctgacagggattaca
gatgagcatgtcagaggttccaaaccactggagcaggttctaaaagagtttcaggagttt
tgtcaggatgcgattctggtggcccataacgctagcttcgacgtgggatttatgaacgtc
aactacgagcgtgcggggttgccgaccattagtcagccggttattgacaccctagaattt
gcccgtaatctctacccagagtacaagcgtcacggtttggggccattgaccaagcgcttt
ggtgttgctcttgagcaccaccacatggccaactacgatgctgaagcaaccggccgcctg
ctcttcatcttcctgaaagatgcactggaaaaacacaacctcaccaacctcacccagctc
aatacagacttgatagcggaagattcgtataaaaaggctcgtgtcaaacacgccaccctc
tacgtgaccaaccaagtggggttgaaaaatatctttaaattggtttcgctctccaatacc
aagtactttgagggagttcctcgcattcctagaaccgtcctcaacgaacaccgtgaaggc
ttaattttgggaacagcctgtcaggagggggaggtatttgacgagctcttgtccaagggg
attgaagatgcggtcaaggtagccagctactatgactttatcgaggttatgccaccagct
ctctatgcgccaatgatcgccaaggagcaattccagaatatggctgaaattgaagagcta
atcaagaagttgattgaagtcggccgcagggccaatttgccagtacttgcgacgggaaat
gtccactacattgaccctgaagaagagatttatcgcgagattattgtccgtgctttgggt
caaggtgccatgattaaccggccaatcggtcagggagaaaatgcccagccggctccgctg
cccaaggcccactttagaaccaccaatgaaatgctagacgaatttgcctttttaggtgat
gatctggcgcgtgagattgtcattagcaatccaaatgctatgctggatcgctttgaagat
gtcgaggttgtcaaaaaggatctctatactccttatatcgaaaaggctgaggaaaccgtt
gcggagttgacctatcaaaaagcctttgagatttatgggaatcccttgcctgacattatt
gatttgcggattgaaaaagaattgtcctctattctgggaaatggttttgccgtgatttac
ctcgcttcgcagatgctcgtaactcgctctaacgaaaggggctatctggtgggatcgcgg
gggtctgtcggctccagcttcgttgcgaccatgattgggattactgaggtcaatcctatg
ccaccgcactatgtctgtccaaattgtcagcacagtgagtttatcacagatggaacgtac
ggatcaggatttgatatgccggataaggcctgtccgcaatgtggaacaacctacaacaag
gatggtcaagatattccctttgaaaccttcctgggatttgatggggataaggttcccgat
attgatttgaacttctctggagatgaccagccggcggcccacttggacgtccgcaagatt
ttcggagaagagtatgcctttcgggcaggtacagtaggtacggtagccgccaagacagcc
tatggttttgttcgtggttatgagcgagattatgggaagttttaccgagatgtagaggtg
gagcgcttggcagcgggggcggcaggtgtgaaacggacgactggtcaacacccaggcggt
attgttgttatcccaaattacatggatgtttatgacttcacccctgttcagtatccggca
gatgatgtaacagccagctggcagacaactcactttaacttccatgatattgacgaaaac
gtccttaaacttgatgttttgggacacgatgatccgaccatgattcggaaacttcaagat
ttgtcagggattgatccgcagaccattcctgccgatgacaagggggttatggcgctcttt
tctggcacggaaatcttgggagtaaccccagagcagattggcacgccgactggtatgctg
ggaatcccagaatttggaaccaacttcgttcggggcatggtggaagaaacacatccgacc
accttttcggagttgttgcagctttcaggactttcacatggtacggatgtatggctggga
aatgctcaggatttgattcgtcaaggaattgcggacctctcgaccgttatcggttgtcgg
gatgacatcatggtttacctcatgcacgcaggtcttccgcctaagatggcctttaacatc
atggagcgggtgcgtaaaggtgcatggctcaagatttcagaagaagagcgtaacggctat
attcaggccatgaaggataacaatgttccagactggtatattgaatcctgtgggaaaatc
aagtacatgttccctaaagcccatgcagctgcctacgttatgatggccctgcgggtggcc
tacttcaaggttcatcatccgatttactactattgtgcctacttctccatccgcgccaag
gcctttgacttggcaaccatgagtggtggcttggataaggtcaaggccaagatggaagaa
atttccctcaagcgcaaaaacaatgaggcttccaatgtggaagtcgacctgttcacaaca
cttgaattggtcaatgaaatgctggagcgtggcttcaagttcggcaaactcgatctctat
aagagccatgcgacggagttcttgattgaggagaacgataccctgattcctccatttgtt
gccatggatggtctgggcgagaacgttgccaaacagctggtcgcagctcgagcagaaggg
gaattcctttctaagacagaactgcgcaaacgtggcgggctctccagcaccctggttgaa
aagatggacgagatggggattcttggaaaaatgccagaggacaaccaactcagcctcttt
gatgatttgttttaa
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integrated database retrieval system