Solanum tuberosum (potato): 102579628
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Entry
102579628 CDS
T02981
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102579628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102579628
Enzymes [BR:
sot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102579628
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102579628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
102579628
NCBI-ProteinID:
XP_006366498
LinkDB
All DBs
Position
Un
AA seq
1179 aa
AA seq
DB search
MEEEKPKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSS
LKLRIWFGKPELFPPQKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIRE
KFNFGQFPIMLKSKLCHLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNY
PTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPV
GIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQ
CLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQ
TSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDV
KKAIEKNAPKQIGLAIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHR
GASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFF
KMRMSILNVLIAIGMTPPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKL
SSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQ
VYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQT
MGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMED
AMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPY
VGQRINPNEPYCSIYNEITSQTTSMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRN
PVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAA
KGGALHGKFVDATPFSNTMKESESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELT
CLIFIGPVYYQRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHG
AAYLLHDRLHTSSDHHIADVCSECGSVLTSSVIQPPKRAVQVILKQLPAREPKKVTCVAC
RSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNEAGA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaaagccaaaggctatgtcacggcctcatttggtggcagagaaagattac
tcagctttgaaagagctattcagtcatcatattgaatcttttgattatatggtcgataat
ggacttgaaaccatgctcttgaatatcaagcctattgaaattgttgattccttttcctcc
ctcaagctaagaatctggttcggcaaacctgaattatttccacctcaaaaagaacgcgct
tccaagaccatgcatgatgctttatatccttttgagtgtagacaagctaaactttcatat
acaggaaagtttttggtggatatctgtttccagtatggtgatggagctgtaatccgggag
aaatttaattttggacagttccctatcatgttgaagtcaaagctatgtcacttgagaggt
gctgatgactccagaaagttaattgcttacaaggaagagccatcagaaatgggcggatat
ttcattcttaaagggcttgagagagttattcgtcttataattttgccaaagcgaaactat
ccaacgagtatggcacggaattcatttcgtgataggcgagaaggatattctgataaagct
gttgttataagatgtgtaagggaagatcaatctgcagtctcacttaaattgtattatcta
aacaatggaagtgcaagacttggattctggatacaaggaagggaatacttgctccccgtt
ggtatcatattaaaggcccttgttgacaccactgatcacgagatatacgtcaatttaaca
tgttgctacaatgaggaatgtgaccgtgtaaagggatctgtcggcacccaacttgtcggt
gaaagagcaaaaattatcctggatgaagttcaggccctatctcttttcacccgagcacag
tgcctgcgacatattggggagcatttccaacctgttgtgattggaatgcaaaatgatagt
tacaaaactgttgccgatgctgtgcttagagactacatatttgtccatctggataacaat
catgataaatttaatctacttatctttatgttgcagaagcttttctctctgatagatcag
acttctgtcctagacaatccagactctctgcaaaatcaagaagttttgctgccgggtcac
ttaattaccatatatctgaaggaaaagctacaagattggctgcttaaattacaacggtca
cttcaggaagaaactgatggtgaaaaaaagaagtttgagctaagtagcttgacagacgtc
aagaaggctattgaaaaaaatgctcccaaacagattggcttggctattgagagcatgttg
aagactgggagattggctacacaatcaggtcttgatttgcagcagagagctggaatgact
gtccaggcagaaaagttaaatttcctccgttttctttcacattttcgtgcggttcatcga
ggtgcctcatttgctggtcttcgtactacaagtgtgcggaagttgttacctgaatcttgg
ggtttcctttgtcctgttcacacacctgatggggagccatgtgggttgcttaatcatatg
actgcatcttgccgcataacctcatactatgattcaaaggggaatgttaaagacttcttc
aaaatgcggatgtccatattgaatgtgctgattgcaattggaatgacaccaccatcacca
aagcttgtgcaaggtggtcctcctgaattgctgtctgtcctactggatggtcgtattgcg
ggctatataccatcggatttaattgaaaaagctgttacccacttgcggagactgaaattg
tcatcaacatcatcgattccagttgatttggaggttggatacatccctttgagcatgaat
ggagcatatccaggtctatatctgttcacatctccttctaggtttgttcgtcctgtaaga
aacatctctgcacctgctgaagagggcaatgatcttgaactcgttggaccctttgaacag
gtgtatatggagataagctgcccggatggtggagatggaggaaggaaaaccttattccct
gccacacatcgagaaattcatccaactaatattttgagtgttgttggcaatcttacacct
tggtctgatcataatcagagtccacgtaatatgtatcagtgtcagatgggtaaacaaaca
atgggtttctcctcacaagcattaaattgtcgtgctgatcaaaagttatatcaccttcag
actcctcaaaccccaattgtacgcacaaaagcttatgagaagtactgtgttgatgactat
ccattaggaacaaatgcaattgtggcagttttggcttattcaggatatgacatggaggac
gctatggtcttaaataaatcatctgtagatcgtggtatgtgtcatgggcatatataccag
acagaaaccattgacttgactgagcaaagcgccaaatctgatcgtgctcagagattgttt
agaagaagcaatttggataagtcgtctcatcagctgattgatactgatggtcttccatac
gtgggacagaggattaatcccaatgagccatattgtagcatttacaatgaaataaccagt
cagacaactagtatgaagttaaagggttcggagcctgttgttgttgattatgttgctgtc
gatgtgaaaaataaaacacatctgcagaaggcgaatatacgttttaggcgctccaggaat
cctgtaattggtgataaatttagcagccgacatgggcaaaagggtgtttgctctcaatta
tggcctgatgttgatatgcccttctcagcagttacaggaatgaggccagatcttattatt
aatcctcatgctttcccttcaaggatgacgattgctatgctgttggagtcaattgctgct
aagggaggtgctttacatgggaagtttgttgatgcaacgccgttctctaacacaatgaag
gaatcagaatcggaatccagttcactggtggatgaccttggttccatgttagcggtttgt
ggcttcaatcaccatggtacggaagtactatatagtggagtatatgggacagaactgact
tgtctaatatttattggacctgtttattatcagcgtctgcgacacatggtttctgataaa
tttcaggtccgttctactggacaggtagaccatatcactcggcagcctatcaaagggaga
aagcgtggtggaggtgtccgctttggtgaaatggaacgagattcactccttgctcatgga
gcagcatatttgctgcatgatagactccatacaagctcagatcatcacattgcagatgtg
tgctctgaatgtggaagtgtcctaacatcatctgttattcagccgccaaaacgagcagtg
caagtgattttgaaacagctacctgctagagaacccaaaaaggttacttgtgttgcttgt
cgttcaagtaaaggaatggagactgttgcaatgccttacgtgtttaaatatttagcggct
gaactggcagccatgaacatcaagatgaccctcaaactaagtaacgaggctggagcttga
DBGET
integrated database retrieval system
