KEGG   Solanum tuberosum (potato): 102580987
Entry
102580987         CDS       T02981                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03020  RNA polymerase
sot03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102580987
  09124 Replication and repair
   03420 Nucleotide excision repair
    102580987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sot03021]
    102580987
   03400 DNA repair and recombination proteins [BR:sot03400]
    102580987
Transcription machinery [BR:sot03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102580987
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102580987
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Ogr_Delta zinc_ribbon_4 DNA_RNApol_7kD
Other DBs
NCBI-GeneID: 102580987
NCBI-ProteinID: XP_006355736
UniProt: M1CLI8
LinkDB
Position
Un
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQ
DVAADPTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaaattttgccgagaatgtaacaacattttgtatccaaaggaagataag
gagcagaagattctcctttatgcttgccgtaattgcgaccatcaggagcctgctgaaaac
aattgtgtgtacagaaatgagatacaccattctgctgcagaacgcacacaagtattgcag
gatgtagcagcagatccaactttgcctcgtacaaaatctgttcgatgttctcaatgtggt
catggagaagcagttttcttccaggcaactgctaggggagaagaaggtatgacgctcttc
tttgtttgctgcaacccaaactgtggccacaggtggagggattga

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