Solanum tuberosum (potato): 102581537
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Entry
102581537 CDS
T02981
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03020
RNA polymerase
sot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102581537
09124 Replication and repair
03420 Nucleotide excision repair
102581537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102581537
03400 DNA repair and recombination proteins [BR:
sot03400
]
102581537
Enzymes [BR:
sot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102581537
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102581537
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102581537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
102581537
NCBI-ProteinID:
XP_006350058
LinkDB
All DBs
Position
Un
AA seq
1203 aa
AA seq
DB search
MYGDNEYVDDRDMMQVEDEGGEGRGDGDEDEDESQEITQDDAWAVISSYFEEKGLVRQQL
DSFDEFIQNTMQEIVDETADIEIRPESQHNPSRQADFVETIYKIKFTQIYLSRPMMTESD
GETNTLFPKAARLRNLTYSSPLYVDVKKEVIKKGHDYEEVTENQEFTKVFIGKVPIMLRS
SYCSLYNLSEKDLTELGECPYDQGGYFIVNGSEKVLIAQEKMSNNHVYVFKKRQPNKYAY
VAEVRSISEGQNKAPSGMFVRMLSRSNSKVGAYGQYIRATLPYIRAEIPIIVVFRALGFV
ADKDILAHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGFTREKRIKYA
KEILQREMLPHVGTREYCETKKAFYFGYIIHRLLLCVLGRRPEDDRDHYGNKRLDLAGPL
LGGLFRMLFRKLTRDVRSYVQKCVDGGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA
GTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQAC
GLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNP
DLLVRTLRQLRRQVDVNTEVGVVRNINLKELRLYTDYGRCSRPLFIVDKKRLRIKKKDIV
ALQMRESTEDSGWHDLVAKGYIEYVDTEEEETTMIAMTINDLTNSRLNPDEAYAETYTHC
EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQK
PLVTTRAMEHLHFRQLPAGINAIVAITCYSGYNQEDSIIMNQSSIDRGFFRSLFFRSYRD
EEKKMGTLVKEDFGRPDREHTMGMRHGNYDKLEDDGFAPPGTRVSGDDVIIGKTTPISQD
EAQGQSARYTRKDHSTSLRHSETGIVDQVLLTTNADGLRFVKIRMRSVRIPQIGDKFSSR
HGQKGTIGMTYTQEDMPWSAEGITPDIIVNPHAIPSRMTIGQLVECIMGKVASHIGREGD
ATPFTDVTVDSISKTLLQCGYQMRGFERMYNGHTGRILSAMIFLGPTYYQRLKHMVDDKI
HSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVC
QQCGLMAIANLKKMSFECRSCRNKTDNVQVYIPYACKLLIQELMSMAIAPRMLTKELKPS
NGK
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtatggagataatgaatatgttgatgatagagatatgatgcaagtagaagacgaagga
ggagaaggaagaggtgatggtgatgaagatgaagatgagtcacaggagataactcaggac
gatgcatgggctgttattagttcatattttgaagaaaaaggacttgtgaggcaacaattg
gattcgtttgatgagtttatacagaatacaatgcaggaaattgttgatgaaactgctgat
atcgaaattcggcctgaatctcagcataatcctagtcgtcaagctgatttcgtggagaca
atctataagatcaagtttactcagatatacttgagtagacctatgatgacagagtctgat
ggagagactaatactttgtttccaaaggctgcaaggttaagaaacttaacatactcttcc
ccgctatacgttgatgtgaagaaggaagtaataaagaaaggtcatgactatgaagaagtg
acagaaaatcaggaatttaccaaagttttcattggaaaggttcctataatgcttcgatca
agctactgcagcttgtataacctatcggagaaagatttgacagagttgggagagtgccct
tatgatcaaggtggatacttcatagtcaatgggagtgagaaagttctgattgcacaggaa
aaaatgagcaataatcatgtctatgtattcaagaaaagacaaccaaacaagtatgcttat
gtggcagaagttcggtctatatccgagggccaaaacaaggcacctagtggcatgtttgtt
aggatgctttctaggtctaattctaaggttggggcgtatggccaatatattcgtgccact
cttccatacatacgggctgaaattccaattatagttgtcttcagggcattaggatttgta
gctgacaaggatatattggcgcatatttgttatgattttgctgacactcagatgatggaa
ttacttcgcccttccttggaagaagctttcgtgattcaaaatcagcaggtggcacttgac
tatattggcaaaagaggatctactgttggtttcacaagagaaaagagaatcaagtatgcc
aaagagattctccaaagggaaatgcttccacatgttggtactagagaatattgtgaaact
aagaaagccttctattttggctacatcatccatcgtcttttactctgtgtactgggacgg
aggcctgaagatgatagggatcattatggaaacaaaagactggatcttgctggcccttta
cttggtggtttattccgaatgctattcaggaagctaacaagggatgtgagatcctatgtt
caaaagtgtgttgacggtggaaaggatgtgaatttgcaatttgccattaaagcaaaaaca
attacaagtggacttaagtattctcttgctactgggaactggggacaagcaaatgctgct
ggtaccagggcaggagtttcacaggttttgaatcgtttgacatttgcatctactctttct
cacttgcgtagattgaactcaccaatagggcgggagggtaaattggcaaaacctagacag
cttcataattctcattggggaatgatgtgtccagcagaaacgcccgaaggacaagcatgt
ggactggtaaagaatcttgctttaatggtgtatataacagtaggatcagcagcaaatcca
attttggagtttctagaagagtggagtacagaaaattttgaggaaatatctcccgcggtt
attccccaatctaccaagatttttgtaaatggttgttgggttggcattcatcgtaatcca
gatctgttggttaggacactgagacagctgaggagacaggttgatgttaatactgaagtt
ggagttgtccgcaatataaatctgaaggaactgaggctgtatacagattatggacgttgt
agtaggccgttattcatagttgataaaaagagattgaggataaagaagaaggatattgtc
gcactgcaaatgagggagtcaactgaagattctggctggcatgatcttgtggcgaaagga
tatattgagtatgttgatactgaggaggaagagactacaatgatcgcaatgaccataaat
gatcttacaaattcaaggctgaacccagatgaggcttatgcggagacctacacacactgt
gaaatccatccatctttgatattgggagtgtgcgcttcaatcataccatttccagatcat
aaccagtcccctcgtaacacatatcaatccgctatgggaaagcaagcaatggggatttat
gtcaccaattaccaatttcggatggatacattggcctatgtactgtattatccacaaaag
cctcttgttactacgcgagctatggagcatttgcatttcaggcagcttccagctggcatt
aatgccattgttgccattacctgctattctggctataaccaagaagattccatcatcatg
aatcaatcttcaattgaccgtggcttcttccgctctctatttttccgttcatatagggat
gaagagaaaaagatgggaacgcttgttaaagaggattttgggcgtcctgatagagaacat
accatgggaatgcgacatggaaattacgataaattagaagatgacggatttgcacctcct
ggaacaagagtttctggtgatgatgtcattattggaaagaccacacctatttctcaagat
gaggctcaaggacaatctgcaagatacacgcgcaaagaccatagtaccagtctacgacat
agtgaaactggaattgtggatcaggttcttttgacaacaaatgcagatggattgagattt
gtcaaaataaggatgagatctgtcagaattccacagattggagacaaattcagcagccgg
catggacaaaaaggaaccattggaatgacttatacacaagaagacatgccatggtccgct
gaaggcatcaccccagatattattgtgaatccacatgctatcccttctcgtatgacaata
ggtcagctagttgagtgcatcatggggaaggttgcttctcacattggaagggaaggagat
gctacccctttcactgatgttactgtggatagtatcagcaaaactctactccagtgtggc
tatcagatgcgtggttttgagagaatgtataatggtcatacaggtcgtatactaagtgca
atgatattcttggggccaacttactaccagagattgaagcacatggtggatgacaagatc
cattctcgtggccgtggtcctgtgcagattctcactaggcagcctgctgaagggagatct
cgcgatggaggactacgatttggggagatggaacgtgactgtatgatagctcatggagct
gcacacttccttaaagagagactgtttgatcaaagtgatgcttacagaattcacgtatgc
cagcaatgtggtttaatggctattgctaatctgaaaaagatgtcattcgagtgcagatct
tgtaggaataaaactgacaatgttcaggtgtatattccctatgcctgcaagcttctgatt
caagagctcatgtcaatggctattgccccaagaatgcttacaaaggaattgaaaccatca
aatggaaagtaa
DBGET
integrated database retrieval system
