KEGG   Solanum tuberosum (potato): 102583025
Entry
102583025         CDS       T02981                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03020  RNA polymerase
sot03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102583025
  09124 Replication and repair
   03420 Nucleotide excision repair
    102583025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sot03021]
    102583025
   03400 DNA repair and recombination proteins [BR:sot03400]
    102583025
Transcription machinery [BR:sot03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102583025
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102583025
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 102583025
NCBI-ProteinID: XP_006361114
UniProt: M1A5G9
LinkDB
Position
Un
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ
YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD
EEAIEKMLTDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggggaagaagaagaaaacgccgctgagctcaaaattggtgatgagtttttgaag
gccaaatgtctaatgaactgtgaagtcgctttgattcttgaacacaagtatgagcagctc
cagcagatgtctgatgatccaaccaatcagatttcgcaggtatttgaaaagtcactgcaa
tatgtgaagcgtttcagtcggtacaagaaccctgatgctgttagacaagctcgagagatc
cttagtaggtatccacttgctgaattcgagctctgtgttcttgggaatctttgccccgaa
accgttgaggaaggtattgccatggtcccatccatcaagaatagaggacgtgcacttgac
gaggaagcaattgagaaaatgctaacagacctttctctaataaagaaattcgagtag

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