Solanum tuberosum (potato): 102592134
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Entry
102592134 CDS
T02981
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102592134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102592134
Enzymes [BR:
sot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102592134
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102592134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
102592134
NCBI-ProteinID:
XP_006351332
LinkDB
All DBs
Position
Un
AA seq
1675 aa
AA seq
DB search
MNQGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQ
CKFCCQSNCSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE
LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNFQFTE
AMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTG
GSEENPSPEVVNATEPLGEAETSLCVTSTDGVENSKARKRQGGDQSDVVEQQKDSFSVAH
LPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKFRPPAK
GGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSKTASGP
GQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTY
PERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISRKLPSSRGAVT
QSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCS
TYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGAVILTM
KNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTVLPAVWKPKPLWTG
KQVITALLNHLTKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRTAENEFLIWKN
ELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCGVDDLVIL
PHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNKEAATAALDMKM
KNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLGQQELEGKR
VPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRS
GYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALKNNQETI
CQKLRHGRKLNSYIEKLPDGLEEKVKHFWEKRTKKLEKKLGKLVKKEEMVKQLKEEEADF
LELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL
MTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQ
LYKLTVKLKKHDFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSESVDS
DETEENASSTRHEEEMLDDEDEDERTEDLSSDAQKRKQQTTDEMDYDDDENEDEAETTAE
IEDEKSEQTDEIDNGDEEEIGNRGNEEQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKK
KERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRM
VKYEVTENTVMWDEYQTKQQSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRA
MLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESL
SPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagggtgcatcagaggccgttgaagcggttcatttcagtttcatgacagatgaa
gaagttcgtagacatagtgttgtaaaagtcacaagccctaatttgcttgatggattacag
ctaccagtgcctaatgggctctatgatccggcaatgggtccccttgatcattattctcaa
tgtaaattttgttgccaaagtaactgctctggtcactgtggtcatattgaacttgtttca
ccagtctacaatcccttgcttttcaatatgctgcacaatcttctgcaaagaacatgcttt
tattgcttccattttagggcatcaagagcagaggttgaaaagtgtgtttctgaattagag
ttaattgcaaaaggtgatgttgttggggccaaaatgattgatgccctttctcctgataat
tctactgatcgggaggaaagtgaagggagccatatgtcatgtgcaatggatgatttgaat
atgcaagatcatcgtgagtacaataagaggccatcttgggacaacttccagtttactgaa
gccatggcagttattgatagaattctcaagacaaaaactgagaaatgtagcaactgcaaa
gcaaagaatccaaagatcagaaaacctagttttggacggtttcatatggatatctcaaat
aagcaaattagggaaaattatatcaacagtggtcgcaggtttaatctgcatgacactggt
ggaagtgaggaaaatccttcccctgaggttgtaaatgccactgagccgttaggggaagct
gaaaccagcttatgtgtgacttctactgatggagtagaaaattctaaggcacgcaagagg
caagggggtgaccagtctgatgtggttgagcaacagaaagactcattttcagtagcacat
ttaccatctcaggtcagaagtattatagagcatttatgggaaaacgaagctcctctttgc
acattcttctgtgatattcagagtcagcaccataatacatctggcaaggtggctgggccc
tctatgttctttttggattctattcttgtaccaccaatcaaattccgtcctccagccaaa
gggggcgactctattatggaacatccacatactgttcttcttggtaaggtcgttcaggca
aatatagctttgggaaatgctcatatcaaccgggctggaaggtctaagatcattagccgc
ttgatggatcttcaacaatctgtaaatgtgctgtttgatagcaaaacagcttctggtccg
ggtcaaaaagatgttggttcaggcatatgtcaaatgttggagaagaaagaaggtattttc
cgccagaaaatgatggggaagagagtcaattttgcctgccgatcagttatatctccagat
ccttatttgtctgtcaatgaaattggaattccaccatattttgctttaaggctaacctat
cccgagaggttgactccttggaatgctgttaaaatgagagatgctgtcatcaatgggcct
gaaaaccatcctggtgctgtctcttttgctgatagaatagctactgtgaaactaccatca
aacaaaaagatgcgtgtagctatatctagaaaattgccttcttcaaggggggcagtgact
caatctgggaggaacaatgagtatgaatttgaaggcaaagttgtttatcggcacttgcaa
gatggggatgttgttcttgtgaatcgacagcctacgcttcacaagcccagtataatggct
cacgttgtccgcgtactgaaaggagagaaaactcttcgcatgcactatgctaattgcagt
acctataatgccgattttgacggtgatgaaatgaatgtccactttccacaagatgaaatc
tctcgtgctgaagcatataacattgtaaatgctaatgaacagtacattgttccgactaaa
ggagatacagttagaggcctgattcaggatcatattgttggtgcagtgattcttaccatg
aagaatacttttttgacccttcatgagttcaaccaacttctgtatggatctggtgtgttt
gccgctgggcctgctccaacttctggaaatcattcaaataaagtttccgtagtagatttt
gaaggtgttgtgcagactgtcttgcctgctgtgtggaaaccaaagcctctttggacaggg
aagcaggtcatcactgcattactaaatcatctgacaaaaggttgtgcaccttgtaccgtc
aaaaacaaagggaaaattccatatccgtatttcctgagcgagagtcgtctagttgagtat
cagtcaagagaagaacaagaagatagaaccgctgaaaatgagttcttaatttggaaaaat
gagctcgtgcgtggtgtaatcgacaaggctcagtttggaaagtttggtttagttcacaca
attcaggagctttatggatccaacaaagcaggcattttactttctgctctgagtcgttta
tttactattttcttgcagctgcatggtttcacttgtggtgttgatgatcttgtcatctta
ccacattacgatattcggaggaaggaggaacttgaaggagatgatgttggtgaagaggct
cattgtgattttgtgaagttcaagcgtggagaaataggccctttggagctccaactagaa
attgagaaagcaatgagcagcaacaaagaagctgccacagcagccttagacatgaagatg
aaaaataaattggcaaataaaggctcacaatttaataaagagttgctgctgaaaggattg
ttgaaacctttccccagaaactgcatcgcccttatgacaattactggggcgaaagggagt
acggttaattttcaacaaatttcctcgtatctgggccaacaagaattggaaggaaaacga
gtgccacgaatggtttctgggaagactttaccctgttttccaccatgggattgtgcttct
agggcaggaggttatgtcagtgatcgctttctttctggacttcgtccccaggagtactat
tttcattgcatggctggtcgtgaaggattggttgatactgctgtcaaaacatctcgcagt
ggttatctgcaaaggtgcttgataaaaaacctggaatctcttaaagtctgttatgattat
actgtccgtgacgcagatggttcaattatccaattttattatggagaagatggcgttgat
gtgcatcggacaagttttctcaaaaacttcaaagcactgaaaaataatcaagaaaccatt
tgccaaaagttgcgtcacggacgcaagctcaattcgtatattgagaaattgcctgatggc
ctggaagaaaaagtgaagcacttctgggagaaaaggacaaaaaagttagagaagaaatta
gggaagctagtgaaaaaggaagagatggtgaagcaactgaaagaggaggaggcggacttt
ctagaactagtgaggcaaaaatacttctcaagtctggcagattcaggagagccagttggt
gtccttgctggtcagtcagtaggtgaaccttcaacccaaatgacactgaacacttttcat
cttgcgggccgtggagaaatgaatgtgactcttggaattccacgtcttcaggagattctg
atgactgcctctgaggctattaagactcccatcttgacgtgccccttcctcggctggcaa
tcaaagaatgatgcccagtctcttttggcaaaagtgaagaagatcactgtggcagatatg
attgagagtatggaggtcaagcttttgccattatcaatctacaaccatcaagtttctcaa
ctatacaagctcacagtgaagctcaagaagcatgattttgtgtcatcagaagattgcgag
tataccctaaaatttgtgttcttaagggagttggaggatgcaatagaaagtcatttggcc
ttgctctctaaaattaatggcatacagaacttcaagacaagctcggaatcagtggattca
gatgaaactgaagaaaatgcttctagcaccagacatgaagaagagatgctggatgatgag
gatgaggatgaaagaactgaagatctcagttcagacgcacaaaaaaggaaacagcaaacc
acagatgagatggattatgatgatgatgaaaatgaagatgaagctgagaccactgcagaa
attgaagatgagaaaagtgaacaaacagatgagattgataatggtgacgaagaagaaatt
ggaaaccgtggcaatgaagagcagatgtctaagttacagtctacggaagacgacatatca
aataccaaatctagtaagtcaaagaccaagaccaaaacaactgtcaaacagaataaaaag
aaagaaagacgtagcaaaaaggattcggataggtgtgtctttgttgatgtggagggactg
cattttgaggtccactttagattcgtcaatgaacctcatatcttgttagctcaggttgcc
caaaagactgcaaagaaagtgtatattaagaactctggtaaaatcgaccaatgcagaatg
gtcaagtatgaagtaactgaaaatactgtgatgtgggatgaatatcaaacaaagcagcaa
agccaagattctgattctgcttattgggccctgaaagcagctggagtggattttggtacc
ttctgggaaatgcaagatgaccttgatgttactcgtatatacacgaataatattcgtgct
atgctgaacacctatggtgttgaagctgcccgggcatcaatcttaagagaggtcaaaact
gttttcggtatctatggggtggagattgattttcgacatttgagtctaatagccgacttc
atgacccatacgggtggataccagccaatgagcagacatggaagcatatccgagtctttg
tcaccgttccttaagatgtcgtttgaaacggcttcaaaattcatagtcgaagcagcagct
catggtttaactgacaacttggagacaccatcctccagaatttgcttagggttgccagta
aagatgggtactggttgttttgacataatgcagaagctagatatttga
DBGET
integrated database retrieval system
