KEGG   Solanum tuberosum (potato): 102596627
Entry
102596627         CDS       T02981                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03020  RNA polymerase
sot03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102596627
  09124 Replication and repair
   03420 Nucleotide excision repair
    102596627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sot03021]
    102596627
   03400 DNA repair and recombination proteins [BR:sot03400]
    102596627
Transcription machinery [BR:sot03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     102596627
  RNA polymerase III system
   RNA polymerase III
     102596627
  RNA polymerase I system
   RNA polymerase I
     102596627
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102596627
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 102596627
NCBI-ProteinID: XP_006364435
UniProt: M1APX5
LinkDB
Position
Un
AA seq 227 aa
MDLNGLAMDVDGDNLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTL
QEFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSR
LILVIQNQMTNPAMKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKY
NLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW
NT seq 684 nt   +upstreamnt  +downstreamnt
atggatcttaatgggttagcgatggatgttgatggggacaatttgggcacttgtttagct
agcttcgttgatgatggtacagttgaaagtcacagatactttcttgctcgcagaaccata
ctcgaaatgcttaaagatcgtggttttgcaatacccaattcagaaatcgacactacactt
caagaattcagagaaaaatatggtcaaacacctgatgttgagcgcctaagagtttccgca
atgcacaggaatgacctaaccaataaggttttggtcatcttctgtgggccaaatgccgtg
aaagtgaatgtcatccgcagcattttaactcaaataatgaacaaggaatctttgagtcgg
ctgatattggtcattcaaaatcaaatgactaatccagctatgaaagctgtggagcttttc
tcatttaaagttgaaattttccagatcacagatttacttgtcaacatcacaaaacatgtt
ttaaagccaaggcatgagttgttgaccgacactgagaaggagaagctgttgaagaagtac
aacttggaagagaagcagctgccgcggatgtcccagaaggatgcaattgctcggtactat
ggacttgagaagggacaggtggtgaaggtcacatacagcagtgaaatcatcgagacacat
gttacttatcgctgtgtctggtga

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