Solanum tuberosum (potato): 102603501
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Entry
102603501 CDS
T02981
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Module
sot_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102603501
Enzymes [BR:
sot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
102603501
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
102603501
NCBI-ProteinID:
XP_006366630
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All DBs
Position
Un
AA seq
384 aa
AA seq
DB search
MLFLARLGAAQAGVFDVTKFGATPNGDISKAILDAFKEACASTSASRIIVPKGRFQMKQV
KLEGPCKAPLEFQLQGTLEASPDPKILPEGEWFTVNYLNQFTLSGTGIFDGQGKAAWAQN
DCAKTKCAHLPYNLSFNFLNSSTIQDITSKDSKNFHMNVNGCNNLTFNRITITAPKESIN
TDGIHVARSKNVNITDSVIGTGDDCISVGDELEQLHITKVTCGPGHGISVGSLGKTPGEK
PVVGVYVKNCTFINTDNGVRVKTWPASHQGVVTELHYEDIIVQNVSNPIVIDQVYCPYNQ
CNKDLPSLVKISKVSIKNVKGTSRTQDAVLLLCSKGVPCEGVEVGDIDITYNGKEGPAKT
SCENVKPTFVGNQNPPVCAGAHTA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgttatttttagcacgacttggagcggctcaggcaggagtgtttgatgttaccaaattt
ggcgcaacacctaatggagatattagtaaggcaatattggatgcatttaaagaggcatgt
gcatcaacaagtgcaagtagaataatagtcccaaaagggagattccaaatgaaacaagta
aaattagaaggtccatgcaaggcacctcttgagtttcaattacaaggcactttagaagct
tctccagatcctaaaatactccctgaaggtgaatggtttactgttaattatcttaatcaa
ttcacattatctggtactggtatttttgatggacaaggtaaagctgcatgggctcaaaat
gattgtgccaaaaccaagtgtgcacatcttccctataatttgagcttcaacttccttaac
agttcaacaatccaagacataacttcaaaagacagcaaaaatttccatatgaatgttaac
ggttgcaacaacttgacatttaaccgaattactatcacagctccaaaggaaagcatcaac
actgatggtattcacgttgctcgatcgaaaaacgtgaacataacagatagtgtaattgga
acaggagatgattgtatctctgttggtgatgaattggaacaacttcatattactaaagtt
acttgtggacctggacatggtattagtgttggaagtcttggaaagactcctggtgaaaag
cctgtagtgggagtttatgtcaaaaattgcacatttattaatactgataatggtgttagg
gtcaagacatggccagcttcacatcaaggtgttgttactgagttgcattatgaagatatt
attgtgcaaaatgttagcaaccctattgttattgatcaagtttattgcccatacaatcaa
tgcaacaaagatttgccatcactagtgaagataagcaaagtgagcataaaaaatgtaaag
ggtacatcaagaacacaagatgcagtactactattatgtagtaaaggagtaccatgtgaa
ggagtggaagttggagatatagacattacctataatggaaaggaaggaccagcaaagact
agttgtgagaatgtcaaacctacttttgtaggaaaccagaatccacctgtctgtgctgga
gctcacactgcttga
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