Solanum tuberosum (potato): 102603938
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Entry
102603938 CDS
T02981
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102603938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102603938
Enzymes [BR:
sot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102603938
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
102603938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
102603938
NCBI-ProteinID:
XP_006365151
LinkDB
All DBs
Position
Un
AA seq
1394 aa
AA seq
DB search
MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN
GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS
SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVK
KLQLKITHEQGNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYL
SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV
KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT
GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP
DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDF
LTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPY
SKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLL
RDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCI
TQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGS
PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFF
FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD
PSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEA
FRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQVFLNT
CISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA
KKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETI
QVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLP
AVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHI
MEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKM
KDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEQVEL
NYQPDPIILEALLD
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaatacaaaattcgttgcaagtcaccaaacagccctacattgaagatgttggc
cctagaaagataaaaagcattaaattttctctcttctcagagtctgaaattttgaaatca
gctgaagttgaagtctaccttgggctttactatgaatctactaaaaagcctattcaaaat
ggcttgttagacccccgcatgggacctccaaacaagaatggatgttgtgaaacatgtcat
ggtaattttagagagtgtccaggtcattatgggtacttggttcttgctctaccagtttat
aatgttggatatttaggcactgtggtggacatcttgaagtgcatatgcaagtgctgttcc
tcgatacttctggatgacaaggagcgtcgagacattttgaagaagatgagaaatccaaga
actgagtttttgaagaagagtgaactacataaaaaggttgtgaaaaggtgtaatgccatg
gcaggtggccagaagactgcgacatgttccaaatgcggatacatgaatggtatggtgaaa
aagcttcagttaaaaatcacacatgaacaaggaaatcgtatcttggatgagatcaatgtt
gctatctctgataagagagagctcagggcatctgttagtgtgcctccagaacttgaccca
aaagtagtttactcccttttcaagaatatgtccgatgaggattgtgagttactctacctt
agtgatagaccagaaaaactccttgttacaagtattccggtgccaccaatagctattcgc
ccttcagtatttgtggatggtggaacacagagcaatgagaatgacatcacggagaggctt
aagcgcattattcaagcaaatgccagtcttcatcaagagatgtctgattccagtcctgtt
aagagtctgaatctttggattgatctgcaaatggaagttgcacaatatataaacagtgat
gttcgtggagtgccactacatatgcaagctcagagaccattgagtggtttcactcaacgt
cttaaaggtaagcagggacgattccgtggaaatctctcaggaaagcgcgtggaatatacg
ggccgaactgttatatctcctgatccaaatttgaaaattacagaggttgccattccaata
ctgatggctcaaattttaacatatcctgagcgagtttcccagcacaatatagagaagttg
aggcaatgtgttcgtaatggaccaaataagtatcctggtgcgaagtttatcaggcatcct
gatggatctgagatatcgttgatgttcacttctagaaagcgtcatgctgatgaattgaaa
tttggttatattgttgatcgacatctagaagatggagatatagtcctgtttaacagacag
ccaagtctgcatagaatgtcaatcatgtctcatcgggcaaggataatgccatggcgcaca
ttgagatttaatgaatctgtatgcaacccttataatgccgattttgatggtgatgagatg
aatatgcatgtgccacaaacagaagaggcgaggacagaggctcttatgttaatgggggtt
caaaacaatttatgcactccgaagagtggagaaattttggttgcttccacccaggatttt
ctgacgtcttcctttctcattacgaggaaggacacattctataaccgtgcttccttttca
cttatttgttcatatatgggtgacgcaatggatcctacagatttaccatctccagcattt
attaagccggttgagctttggactgggaaacaacttttccatatgctactgcgtccgtat
tcaaagatgagagtctatgtaaatctaacagtcacagaaaagagttacagtgggaaaggg
gaaacaatgtgcccaagtgatggatttgtttatttccgtaatagcgaactgatcagcggg
cagctcgggaaggctacactaggaaatggaaataaggatggtctatactctgttctgttg
agagactacaagtcccatgctgctgcaacatgcatgaatcggcttgcaaagttgagtgct
cggtggattggaaatcatggattttccatagggattgatgatgtcacacctggggaaaac
ttagttaagcaaaaacaaggggaaattcatcgaaattacaagaaatgcgaggattgtatt
acacaatttaatgaaggaaagcttgctgtgcaacctggttgtgatgctgcacagactctg
gaggctgaagtaactatgtcgttgaataaagttcgtgacgacataggaaaaatttgtatg
aaagcactagactggaggaatagtcctctaatcatgtcacagtgtggttcaaaaggatcc
ccgattaacataagccagatgattgcatgtgttggtcagcagtctgttggtggccgtcgt
gctcctgatggattcatagatcgaagtcttccgcattttcccttcaaatcaaaatttcca
gctgctaaagggtttgtggctcattccttttttgacggtttgtcagcaactgagtttttt
tttcacacaatgggaggaagagaaggccttgttgatacggcggttaaaactgctgacacc
ggatacatgtctcgtcgacttatgaaagctttggaggaccttgctgtttattatgacagc
actgtacgaaatgctagcgcatgtatagttcagttcatgtatggtgatgatggcatggat
ccttcacagatggaagagaaaaaaggacgtcctttaaactttagcagattatttatgaaa
gttaaggcaacgtgtcctcctggaggtgagaagagtttgtcttactcagagatctgcgaa
atagtcaatgaaaggctctcatatcatgatatgactcccgaaggggggtgctcagaggca
ttccgttcttcactgtctgattttttgattaaaaatttagctgaaaccttgaaaaattta
cgggaatccctattattgggtgaagagcagtatgaaggggatgatcgtggatatcttgaa
aaaattgcgttaaacatatctggtattactaagaggcaactacaggtgttcctcaacacg
tgcatctctcggtatcacctgaaaagactagaagctggaactgcgattggtgcaattgga
gctcagagtattggagaacctgggacacagatgacactgaaaacctttcactttgctgga
gttgcaagcatgaatgttacacttggagttcctcgaataaaagaaatcataaatgcagca
aaaaagatcactactcctattattactacaaaacttctgtctgctgctaatttaactgca
gcaaggatgattaaagcccgtattgaaaaaactcttttggggcaggtggctaagagtgta
aagattgtgttggcatctcgattagcatcaattgctatttcacttgatatggagacaatt
caggtgtcacaactgtgtattgatgcttatactgtcaagcaatcaattttacagacttca
aaaataaaattgaaagaacatcaaataaaagttctgaatcccaggaagctggaagttttc
cctcaggctaataaagataaactgcattttgaactgcaccggctgaaaaataagctgcct
gctgttgttgtgaagggtattactacagttcaaagggctgtggtgaacaaagaacaacaa
aaagatcgtaaaaatgatgtcaaaggggaaacatatgagttgcttgttgaaggtaccggt
ctccttgctgtaatgggcattgaaggagttgatggacgttatacaaagagcaatcatata
atggaggtgcagaatactctaggcattgaagcagcaagggtatctataattgatgagatt
aattataccatgtcaagtcatggaatgacaatagacttgcggcacatgatgcttcttgca
gatctgatgacatataagggtgaagtcctcggaataactagacatggtgttcagaaaatg
aaagatagcgtactgatgttagcttcatttgagaagacaaccgaccacctgtttaatgca
tctgtaaatggaagggatgataagatagaaggagtaaccgaatgtatcatcatgggcata
ccaatgacgataggcaccgggatgtttaaacttcggcaacgtgttgagcaggttgagctg
aattatcaaccagaccctattatacttgaggcactactggattaa
DBGET
integrated database retrieval system
