Sitophilus oryzae (rice weevil): 115883602
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Entry
115883602 CDS
T07985
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115883602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115883602
Enzymes [BR:
soy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115883602
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
115883602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
115883602
NCBI-ProteinID:
XP_030757821
UniProt:
A0A6J2Y3H7
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MHWVTIKKFGIPDCVIMPKEQYREADVARKISHLSFGIESAENMQQQSHIQVVAKNLYNQ
DTGRTPVSYGVLDKRLGTNSKESPCQTCGKNINECVGHFGYMDLELPVFHVGYFRSIIAV
LQSICKKCSQVLLDESDKNDYRHRLSNPNLSYITKKALRKKINEKCKKVQKCPYCKSNNG
FVKKMTAPKGSTTNTVLKIVHEIYKEKDKERLLEKLPNDFNLAIENNPEIQTALGNSVSE
ILTPIDVVKLFERIPSSDIPLLAMEPERAQPKDLIFTRMLVPPVTIRPSVVSDLKAGTNE
DDLTMKQSEIIFINQVIQKHKLSGASVNMYQECWDFLQLQTALYINSELSGVPLNMMPKK
AGRGLVQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLEIDQVGVPMHIAKILTFPERV
IQANIHLMRLLVINGPDVWPGANYVQQKGSAFKKFLKYGNREKLAQELKLGDTIERHLHN
DDVVLFNRQPSLHKLSIMAHRAKIHTNRTLRFNECVCNPYNADFDGDEMNLHLPQTEEAK
AEALILMGNKNNLVTPRNGELLIAATQDFLTGAYLLSKKDTFFDKIHAMQLAATLLAGND
THMDIDMPPPCIIKPRILWSGKQIISLIFKPNKSSNVLANLEAKGKAYTKNREMCVKDSY
VIIKNSQLIAGTLDKGHLGSGGKGGNIFYVILRDFGQNFAIKSMWRLGRMTSSYLMNTGF
SIGIGDVTPGEALVNRKKKLLKDGYEKCDEYIKQMAQGKLQSQPGCTPEETLEAIILKEL
SVIREHAGQACVAELPPTNSPLIMALSGSKGSFINISQMIACVGQQALNGKRVPNGFEDR
SLPHFLHHSKTPEAKGFVENSFYSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLV
KSLEDLVVHYDGSVRNAEGDIVQMTYGCDGLDPTFMEGKDCPVDFDRVLAHIKAKCPYRT
EIALNGDQVRKATQAFLATGALDECSDDFKKELSKFMENVAERTDKVLKRFGYTKVVKEI
ERLTCSQLVTFLETCGLKYTRSIIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNI
TQGVPRIKEIINATKTISTPIINASLVNNKDPWFAREVKGRIERTTLGEISTFIDDVYTK
QEAFLLIQLDYERIKLLKLEINAETIRYSICTTSKLKLKPGDVHVESDTIITVHPNISIN
SRRLNFALNELKDQLPNVVVKGLPSVNRAVIAREDRGNNTTYSLCVEGNNFREVMATYGV
DGNKTVSNNIIEVYHALGIEAAREVIMSEIKMVMENHGMSVDYRHIMLLAAQMTHTGEVL
GITRQGLSKMKPSVLNLASFEKTADHLFDAAYYGQTDKISGVSENIIMGMPIPIGTGIFK
LLHKPEDVDQHPKTNNLLFESAV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgcattgggtgactataaaaaagtttggaatccccgattgcgtgataatgccaaaagaa
caatacagggaggccgatgtggccaggaaaatctcccatttaagcttcggaattgaaagt
gccgagaatatgcagcaacaatctcatattcaagtagtagcaaaaaatctatacaatcaa
gatacgggaaggactcctgtatcttatggtgttcttgataaaagacttggtacaaactct
aaagaatcgccatgtcaaacatgtggaaaaaatataaatgagtgcgttggacatttcgga
tatatggatctcgaactccctgtctttcatgtgggatattttcgtagtatcattgcagta
cttcaatcgatctgtaaaaaatgttcacaggtgctgttagatgaatctgataaaaatgat
tatagacatagattatcaaatcctaatctaagttatataacaaaaaaagctttaagaaaa
aagataaatgaaaaatgtaagaaagttcaaaaatgtccatactgtaaatctaacaatggt
tttgtcaagaaaatgactgcacctaaaggaagtactaccaatacagttttgaaaattgtt
cacgaaatatacaaggaaaaagataaagaaaggctattggaaaaactccctaatgacttt
aatttggctattgaaaataatccagaaattcaaacagcattaggaaatagtgtttctgaa
atattaacacctattgatgttgtgaaattatttgaaagaataccttcaagtgatattcca
cttttagcaatggaaccagaaagagctcaacctaaagatttaatatttacaagaatgctt
gtaccaccagtaaccataaggccttctgtagtgtcagatttaaaagctggaacaaatgaa
gatgatttaacaatgaaacaatcagaaataatatttattaatcaagtcattcagaaacat
aaattgtcaggtgcatcagttaatatgtatcaggaatgttgggatttcctacagttacaa
actgctctgtatattaacagtgaactttcaggtgttccactaaatatgatgcccaaaaaa
gccggtagaggtcttgtccaaagattaaaaggtaaacaaggtcgatttcggggtaacttg
tctggtaaaagagtggatttttcgtcgagaactgtaatttctcccgatccaaacttggaa
attgatcaagtaggagtaccgatgcatatagctaaaattttgacatttcctgagagggtt
atacaagccaacattcatttgatgcgattattagttataaatggccctgacgtatggcct
ggcgctaattatgtacagcagaagggttcagcctttaagaaatttctcaaatatggtaac
agagaaaaattggctcaagagctaaagctaggtgatacaatagaacgtcatttacataac
gatgatgtagttctttttaatcggcaaccaagtttgcataaattgtctattatggcacac
cgagcaaaaattcatactaataggacattaagatttaacgaatgtgtttgtaatccatat
aatgctgattttgatggagatgaaatgaatttgcacttgcctcaaacagaagaagctaag
gctgaagctctaattttaatggggaataaaaataatttagtaacgccgaggaatggagaa
ttattaattgctgctacacaggactttttgactggagcatatttgctctctaagaaagat
acatttttcgataagattcatgcaatgcagttggctgcaactttgttagctggaaatgat
acccatatggatattgacatgcctcctccatgtattataaagccaagaatattatggtct
ggaaaacaaataatttccttaatatttaagccaaataagtcgtcaaatgtattagcgaat
cttgaagctaaaggcaaagcttatacaaaaaatagggagatgtgtgttaaagactcttat
gtaatcatcaagaattcccaattaattgctggtacattggataaaggacatttgggtagt
ggaggaaaaggaggaaatatattttatgtaattttaagagattttggacaaaattttgca
atcaaatctatgtggagacttggtaggatgacttcaagttatttaatgaatactggattt
tcaattggtattggagatgtgactccaggtgaagctttagttaacagaaaaaagaaatta
ctgaaagatggatacgaaaaatgtgatgaatacatcaagcaaatggcccaaggcaagttg
caaagtcaacctggttgcactccagaagagaccttagaagctataattttgaaggagctg
tccgttataagagagcatgctggtcaggcttgtgtagctgagctcccaccaacaaatagt
cctctaattatggctctgtcaggttcaaaaggttcattcatcaacatttcccaaatgata
gcttgtgtgggccaacaagcgttaaacgggaaaagagtgccaaacggatttgaagacaga
tctttaccgcattttttacaccactctaaaacaccagaagctaaaggatttgttgaaaat
agtttttatagtggtttaactcctactgaattcttttttcacacaatgggtgggagagaa
ggtttagtagatacagcggtaaagacggctgaaactggctacatgcaacggcgattagtt
aaatctttagaagacttggttgtacattatgatggttcagtgagaaatgctgaaggtgat
attgttcaaatgacttatggatgtgatggcttggatcctacttttatggaaggcaaagat
tgtccagttgattttgatagagtattagcccatataaaagcgaagtgtccatatagaacc
gaaattgctcttaatggtgatcaggtcagaaaagcaacacaagcgtttttggctacgggg
gcgctggacgaatgcagtgacgattttaagaaagaattgagcaaatttatggagaatgtg
gctgaaagaactgacaaagtattgaaacgttttggttacacaaaagtagtgaaagaaatt
gagagattaacctgcagtcaactagttacattcttagaaacatgtggactaaaatataca
agatctattattgaaccaggaacagcagttggtgcattggctgcacaaagtattggcgaa
ccgggaactcaaatgacactgaaaacttttcactttgctggtgttgctagtatgaatatt
acccaaggagtaccaagaatcaaggaaatcatcaatgctacaaaaactattagtacgcca
attattaatgcaagtttagtaaacaataaagatccatggtttgctagagaagttaaaggt
agaattgaaagaactactttaggagagatctctacatttatagatgatgtatatacaaaa
caagaagcatttttgttaatccagttagattatgaaagaatcaaattacttaaattagaa
ataaatgctgaaactattagatatagtatctgtactacatcaaaattaaaattaaaacca
ggagatgtgcatgtggaaagcgatacaataattacagtgcatcctaatatatccataaat
tcaaggaggcttaattttgctctcaatgaactcaaagatcaactaccaaatgttgttgtt
aagggattaccttcggttaatagagctgtaattgccagagaagatagaggcaataataca
acatacagcctttgtgttgaaggaaataatttcagagaagtaatggctacttatggagtt
gatggaaataaaacagtatccaataatatcatcgaagtatatcatgcacttggaatagaa
gcagccagagaggtcataatgtctgaaattaaaatggtcatggaaaaccacggtatgagt
gttgattatcgacatattatgttattagcagcacaaatgactcacactggtgaagtattg
ggaataactagacaaggtttatcaaaaatgaaaccatctgtacttaatttggcttctttt
gaaaagactgctgatcacctgtttgatgcagcctattatggtcagacagataaaatcagt
ggtgtgtccgaaaatataataatgggaatgccaattcctatcggaacaggaatttttaag
ttactccataaaccagaagatgttgaccaacatccaaaaaccaataatcttctatttgaa
tcagctgtatag
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