KEGG   Sitophilus oryzae (rice weevil): 115888662
Entry
115888662         CDS       T07985                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
soy  Sitophilus oryzae (rice weevil)
Pathway
soy03020  RNA polymerase
soy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:soy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115888662
  09124 Replication and repair
   03420 Nucleotide excision repair
    115888662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soy03021]
    115888662
   03400 DNA repair and recombination proteins [BR:soy03400]
    115888662
Transcription machinery [BR:soy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     115888662
DNA repair and recombination proteins [BR:soy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115888662
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta CpXC DZR DUF3716 TF_Zn_Ribbon DUF4892 zf-ribbon_3 CEBP_ZZ
Other DBs
NCBI-GeneID: 115888662
NCBI-ProteinID: XP_030764302
UniProt: A0A6J2YLM9
LinkDB
Position
Unknown
AA seq 130 aa
MSKPTGYDSHSEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQHADSKCIYV
NKIMHEIDELTHIVSDVISDPTLPRTEDHHCPNCQHREAVFFQAQTRRAEEEMRLYYVCT
NPHCAHRWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtctaaacccactggatacgactcccacagtgaaggcccaggttttgttggtatccga
ttttgccaggaatgtaataacatgttgtacccaaaagaagacaaagaaaacaagatatta
ctgtacgcttgcagaaattgtgactacaaacaacatgccgattctaaatgtatctatgtt
aacaaaattatgcacgaaatcgatgagttaactcatatagtatcagatgtaatatcagat
ccaacattaccaaggactgaagatcatcattgtcctaattgccagcacagagaagcggta
tttttccaagctcaaacaagaagagctgaagaagaaatgagattgtattatgtatgtacc
aatccgcattgtgctcaccgatggacagagtga

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