Spathaspora passalidarum: SPAPADRAFT_51026
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Entry
SPAPADRAFT_51026 CDS
T03101
Name
(RefSeq) mismatch repair ATPase MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SPAPADRAFT_51026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_51026
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SPAPADRAFT_51026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
AAA_27
AAA_21
Motif
Other DBs
NCBI-GeneID:
18871506
NCBI-ProteinID:
XP_007375750
JGI:
51026
UniProt:
G3AN91
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MSDPKKKPTTPLKPTKTNAGGGSTGSQKKQSSLMAFFKPVAKSDSKAPVPPPQLQNKQPQ
LPSSSPLKSKSVKNEILSDKENEQESTSANTSFNAPDSSFTSYSSKKEKMADADEISQVK
VAKTHLNKAATNLNSSPVTKRGRGTKNISYAESSDEEEEEDDIKVGKKRRKVIADDSDND
DEFTPAGEEPSDDDMSDFIVDDDKDEDSPVEEEGEEEEDNDDDVPLRTKQPKKATKSMTP
TKRALDKKFNAKSAYSPSNYTPVKSSPSTKVTPVKKSFAKENEERYQWLVNIKDAEKRTP
DDPEYDSRTLYIPQAAWSKFTAFEKQYWEIKSKMWTTVVFFKKGKFYELYENDAIIANTE
FDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQKESLLAKEMRGGSTKEEK
IIKRELTGILTGGTLTDLDMISDDMSTYCLSIKEEEKDDGSKIFGVAFVDTSTSELNLIE
LEDDPECTKLDTLITQVKPKEIICEKGNLCGIANKILKFCAHNNHQIWNQLNPITEFWDY
DVTVENLVTSKYYPAEDLDDFSQYPVVLTSFKEKHQVAFNAFGGLLYYLKTLKLDSSIMS
LGNIHEYRISRNEASHLILDGITLNNLEILNNSTDGGDKGTLFKLLNRATTPFGKRQLKK
WILYPLMKINEINQRYDAVDYLMNDGLEIRSIVESCLNELPDLERLLARIHAGNLRFRDF
LKVVESFESIAKCLNQLGEFTNVESGAFYKYIREFPQEIARLITEWEDAFDREQAKNDVI
IPAKGIDEQFDESQAIIDDLQGQLDQHLKEYKKRFKSHEICYRDSGKEIYLIEFPVKLVK
QIPNDWQQMGATSKVKRFWSPEVRKLVRELLEQRERHKMVCDTLRNRMYSKFDSHYNIWM
KVIATISKIDCLLALAKVSGTIGYPSCRPKFVDSDRGYINFQELRHPCFISTREFIPNDV
MLGGDQPHFGLLTGANAAGKSTLMRTTALAVILSQIGCYIPAQSAELTPVDRIMTRLGAN
DNILQGKSTFFVELSETKKILSNATPRSLVILDELGRGGSSSDGFAIAEAVLYHLATHLQ
SLGFFATHYGTLGASFKTHPQIKPLRMGIIVDSNTRNITFLYKLEEGAASGSFGMNVASM
CGISDEIVVNAEMAAKNYEQTSKSKKSNLPKIEDGLSLGLQSDFAWIAKEQWGVLSKDIL
NYEEPVKQHALENIFTMIDQLSV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcctaaaaagaaaccaacgacaccgttaaaacccacaaagaccaatgcaggc
ggaggaagtaccggatctcagaagaaacaatcttcattgatggcattcttcaaacctgtt
gccaaatcagattctaaagctccagttccaccaccccaattgcaaaacaagcaaccacaa
ttaccttcttcttctcctttgaagagcaaatctgtcaagaatgagatattaagcgacaag
gagaacgaacaggaatctactagtgcaaatacctcgtttaatgcccctgacagtctgttt
actagttattctctgaaaaaggaaaagatggcggatgctgatgaaatctctcaagttaaa
gttgcaaagactcatttgaataaagctgctaccaatttaaactctagtcctgtgactaag
cgtggacgtggtaccaagaatatcagctatgccgaatcatcagatgaggaagaagaagaa
gacgacattaaagttggcaaaaaaagaaggaaagtgattgctgatgatagtgataacgac
gatgagttcacaccagctggagaagaaccatctgatgatgacatgagtgatttcatagtt
gatgatgataaagacgaagacagcccagtcgaagaagaaggagaggaggaagaagataat
gacgacgatgtccctctcagaactaaacagcctaagaaagcaactaagtcaatgactcca
acaaagagagctcttgataaaaaattcaacgctaaatcagcctattctccttcaaattat
acccctgtcaaatctagtccttcgaccaaggttaccccagtcaagaaatcgtttgcaaag
gaaaacgaagaaagataccaatggttagtcaacatcaaagatgcagaaaagagaactcct
gatgatccagaatatgattctcgtaccttatacatcccccaagctgcctggtctaaattc
actgcatttgagaaacaatattgggaaattaaatcgaaaatgtggactactgtggttttc
tttaagaaagggaagttttatgaattatatgaaaatgatgctattattgccaacactgaa
tttgatttaaagattgctggaggtggaagagccaatatgaaattggctggtatccctgaa
atgtcgtttgaatattgggccaaggagtttattagtcatggttataaagttgccaaagtt
gaccaaaaggaatccttattggctaaggaaatgagaggtggatctaccaaagaagaaaag
attatcaagagagaattgactgggattttaaccggaggtactttgactgatttggatatg
attagtgatgatatgtcaacttactgtttaagtattaaggaggaagaaaaagacgatggt
tccaagatatttggagttgcatttgtagacacctcgacctcagaattgaatttgattgaa
cttgaagatgatccagaatgtaccaagttagacactttgataactcaagtaaaacccaaa
gaaatcatttgtgaaaagggaaatttgtgtggtattgccaacaaaatcttgaagttctgt
gcccacaacaaccatcaaatttggaatcaattgaatccaattaccgagttttgggattat
gatgtcacagtagagaatttagtgacttcaaagtactacccagccgaagacttagatgat
ttttcacaataccctgtggttttaaccagctttaaagaaaagcatcaagttgcattcaat
gcatttggtgggttattgtattatttgaaaacgttgaagttggactctagtattatgagt
cttggtaatatccacgaatacagaatttctcgtaatgaagcttctcatttgattttggat
ggtattaccttgaacaacttggaaattttgaacaattccaccgatggtggtgataaaggt
actctttttaaattgttaaatagagccactactccatttggtaagagacaattgaaaaaa
tggatattgtacccattgatgaaaatcaatgagatcaatcaaaggtatgatgctgttgac
tatttaatgaatgatggtttagaaattcgctcaatcgtagaatcatgcttgaatgaatta
cctgatttagaaagactattagccagaattcatgctggtaatctcagatttagagacttt
ttgaaagtggttgaaagttttgaaagtattgccaaatgtttgaatcaattgggcgaattt
accaatgtcgaatcgggagctttttacaaatacattcgggaattcccgcaagaaatagct
cggttaattaccgaatgggaagatgcatttgacagagaacaagccaagaacgatgtcatt
atccctgccaagggtattgatgaacaattcgatgaatctcaagcaataatagatgatttg
caaggacaacttgatcagcatcttaaagaatacaagaaaagattcaaatctcatgaaatt
tgctaccgtgattccggtaaagagatttatttgattgaattccctgtcaaattggtcaaa
caaatccctaatgattggcaacaaatgggtgctacttctaaagtcaagagattctggtca
ccagaagtaaggaaattagttcgtgaattgcttgaacaacgtgaaagacacaagatggta
tgtgatacgttgagaaacagaatgtattcgaagttcgatagtcactacaatatctggatg
aaggtaattgctacaatttctaaaattgattgtttgttagctttagctaaagtatctggc
actattggatatccttcttgtcgtccaaagtttgttgattcagatagaggatatatcaat
ttccaagaattgagacatccatgctttatcagtacacgtgaatttatccctaatgatgtc
atgttaggaggcgatcaaccccattttggtttacttaccggtgctaatgctgctggtaaa
tctacattgatgagaacaaccgcgttagcagtaattctcagtcaaattggttgctatata
cctgcacagctggccgaattgactccagtagatagaataatgaccagattgggtgcaaat
gataatatattacaaggtaaatcaacatttttcgtggaattatctgaaacgaaaaagatc
ttgagtaatgctacacctaggtcattggttattttagatgaattaggaagaggtggttct
agtagtgatggatttgccattgccgaagcggtattataccacttagcaacacatttgcag
tcattgggattctttgctactcactatggtacattgggtgcatctttcaaaacccatccc
caaattaaaccactccgcatgggtatcattgttgatagcaacacgcgtaatattaccttt
ttgtacaaattagaagaaggtgccgcctcagggtcgtttgggatgaatgttgcatccatg
tgtggaatttcagatgaaattgtggtgaatgcagaaatggctgctaaaaattacgaacaa
acatccaaatctaaaaagtcaaatcttcccaagattgaagatggactaagcttgggatta
cagagtgattttgcctggatagcaaaggaacaatggggtgtattgagtaaagatattttg
aattatgaagaaccagttaagcaacatgcattggaaaacatattcaccatgattgaccag
ttaagtgtatag
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