Sphingomonas panacisoli: FPZ24_06850
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Entry
FPZ24_06850 CDS
T07288
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spai
Sphingomonas panacisoli
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spai03009
]
FPZ24_06850 (rimO)
Enzymes [BR:
spai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FPZ24_06850 (rimO)
Ribosome biogenesis [BR:
spai03009
]
Prokaryotic type
ribosomal protein modification factors
FPZ24_06850 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDZ07233
UniProt:
A0A5B8LGM2
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All DBs
Position
complement(1350045..1351376)
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AA seq
443 aa
AA seq
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MATVLPSPPRVGMVSLGCPKNLVDSERILTKLRSDGYQMSPDYAGADVVLVNTCGFLDSA
KEESLEAIGEALSENGRVIVTGCMGKEAETIRARFPKVLAITGAHEYEQVVGAVHDAAPM
PPNAFLNLVPESGLKLTPRHYSYLKISEGCNHRCAFCIIPSLRGDLVSRRPDAILREAEK
LVEAGTKELLVISQDTSAYGVDIKHFPRMWHGQEVRAHMTDLARELGKIAPWVRLHYVYP
YPHVDQVIPLMAEGLVLPYLDIPFQHASRNVLKLMRRPANEAKVLERVHKWREISPDIAI
RSTFVVGFPGETEEDFQYLLDWLDEAQLDRVGAFRFEPVEGAAANALPDHVPEEVKEERY
ARIMEKTAAISAAKLAAKVGRTLPVIIDAVDADGGATGRSQADAPEIDGEVFLRDAGHLK
VGDITPVLIEEADDHDLYGVPAA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtactcccctcccctccccgcgtgggcatggtttcgctcggctgtcccaag
aacctggtcgacagcgagcgcatcctgaccaagctgcgttccgacggctatcagatgtcg
cccgattatgccggcgccgacgtcgtgctggtcaatacgtgcggctttctcgattcagcg
aaggaggaatcgctggaagcgatcggcgaggcgctgtccgaaaacggtcgcgtcattgtg
accggctgcatgggcaaggaagccgagacgatccgcgcgcgcttcccgaaggtgctcgcg
attaccggcgcgcacgaatacgaacaggtcgtcggcgcggtgcatgacgcagcaccgatg
ccgcccaacgcgttcctcaacctggtgccggaaagcgggctgaagctcacgccgcgccac
tacagctatctgaagatttcggagggctgcaaccaccgctgcgcgttctgcatcatcccg
tccttgcgcggcgatttggtgtcgcgccgccccgacgcgatcctgcgcgaagccgagaaa
ctggtcgaggcaggcacgaaggaactgctggtcatcagtcaggacacatcggcatacggc
gtcgatatcaagcatttcccgcgcatgtggcacggacaggaagtccgcgcgcacatgacc
gatctcgcccgcgagctgggtaaaatcgcgccatgggtgcggctgcactacgtctacccg
tatccgcacgttgatcaggtcatcccgctgatggccgaggggctggtcctcccgtatctc
gacatcccgtttcagcacgccagccgcaatgtgctgaagctgatgcgccgccccgccaac
gaggcgaaggtgctggaacgcgtccacaaatggcgcgagatcagccccgacatcgcgatc
cgatcgacctttgtcgtcggcttccccggcgagaccgaggaggatttccagtatctgctc
gactggctcgacgaagcgcagctcgaccgcgtcggtgcattccgcttcgagcccgtcgag
ggtgcggcggcaaacgcgctacccgaccatgtgcccgaagaggtcaaggaagagcgttac
gcccgaatcatggaaaagaccgccgcgatcagcgccgcgaagctcgccgccaaggtcggc
cgcacgctgcccgtgatcatcgacgcggtggacgcggacggcggcgccaccggccgcagc
caagccgacgcgcccgagatcgacggtgaggtcttcctgcgcgacgccgggcatctcaag
gtcggcgacatcacgccggtgctgatcgaagaggccgacgaccacgatttgtatggtgtg
ccggcggcctag
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