KEGG   Saccharomyces paradoxus: SPAR_O04460
Entry
SPAR_O04460       CDS       T08193                                 
Name
(RefSeq) Rpa190
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
spao  Saccharomyces paradoxus
Pathway
spao03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPAR_O04460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spao03021]
    SPAR_O04460
Enzymes [BR:spao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SPAR_O04460
Transcription machinery [BR:spao03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     SPAR_O04460
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 54633875
NCBI-ProteinID: XP_033769450
UniProt: A0A8B8V0A7
LinkDB
Position
XV:939447..944444
AA seq 1665 aa
MDISKPVGSEITSVDFGILTAKEIRNLSAKQITNPTVLDNLGHPVSGGLYDLALGAFLRN
LCSTCGLDEKFCPGHQGHIELPVPCYNPLFFNQLYIYLRASCLFCHHFRLKSVEVHRYAC
KLRLLQYGLIDESYKLDEITLGSLNSSIYTGDEAIEDNEDEMDGEESKQSKDISSTLLSE
LKSKRSEFVDMAIAKALSDGRTTERGSFTATVNDERKKLVHEFHKKLLSRGKCDNCGMFS
PKFRKDGFTKIFETALNEKQITNNRVKGFIRQDMIKKQKQAKKLDGSGDQSTNDEESFDV
GRNPTARPRTGSTYILSTEVKNILDTVFRKEQRVLQYVFHSRPNLSRKLVKADSFFMDVI
VVPPTRFRLPSKLGEEVHENSQNQLLSKVLTTSLLIRDLNDDLSKLQKDKVSLEDRRVIF
SRLMNAFVTIQNDVNAFIDSTKAQGRTSGKVPIPGVKQALEKKEGLFRKHMMGKRVNYAA
RSVISPDPNIETNEIGVPPVFAVKLTYPEPVTAYNIAELRQAVINGPDKWPGATQIQNED
GSLVSLIGMSVEQRKALANQLLTPSSNVSTHTLNKKVYRHIKNRDVVLMNRQPTLHKASM
MGHKVRVLPNEKTLRLHYANTGAYNADFDGDEMNMHFPQNENARAEALNLANTDSQYLTP
TSGSPVRGLIQDHISAGVWLTSKDSFFTREQYQQYIYGCIRPEDGHTTRSKIVTLPPTIF
KPYPLWTGKQIITTVLLNVTPPDMPGINLISKNKIKNEYWGKGSLENEVLFKDGALLCGI
LDKSQYGASKYGIVHSLHEVYGPEVAAKVLSVLGRLFTNYITATAFTCGMDDLRLTAEGN
KWRTDILKTSVDTGRQAAAEVTNLDKDTPADDLELLKRLQEILRDNNKSGILDAVTSSKV
NAITSQVVSKCVPDGTMKKFPYNSMQAMALSGAKGSNVNVSQIMCLLGQQALEGRRVPVM
VSGKTLPSFKPYETDAMAGGYVKGRFYSGIKPQEYYFHCMAGREGLIDTAVKTSRSGYLQ
RCLTKQLEGVHVSYDNSIRDADGTLVQFMYGGDAIDITKESHMTQFEFCLENYYALLKKY
NPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYNQSIKYDPVLAKYNPAKYLGSVSENF
QDKLESFLDKNTKLFKSADGVNEKKFRALMQLKYMRSLINPGEAVGIIASQSVGEPSTQM
TLNTFHFAGHGAANVTLGIPRLREIVMTASAAIKTPQMTLPIWNDVSDEQADTFCKSISK
VLLSEVIDRVIVTETTGTSNTAGGSAARSYVIHMRFFDNKEYSEEYDVSKEELQNVISNQ
FIHLLEAAIVKEIKKQKRTTGPDVGVAVPRLQTDVTSSSSNSKRLEEDNDEEQSHKKTKQ
AVSYDEPDEDEIETMREAEKSSDEEGVDSDKESDSDSDEDEDVDMNEQINKNIVEANNNM
SKVQRDRQSAIISHHRFITKYNFDDESGKWCEFKLELAADTEKLLMVNIVEEICRKSIIR
QIPHIDRCVHPEPENGKRVLVTEGVNFQAMWDQEAFIDVDGITSNDVAAVLKTYGVEAAR
NTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQGMETSTSSFMKMSYETTC
QFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVPNAA
NT seq 4998 nt   +upstreamnt  +downstreamnt
atggatatttctaaaccggttggttctgaaatcacatccgttgatttcgggatcctaaca
gctaaagagattagaaatctatcagcaaagcaaattaccaatccaacggttttagataac
ttgggtcatccagtatcgggcggtttatatgacttagccttaggtgcattcttaaggaat
ttgtgttcaacttgtggtttggatgaaaaattttgtcctggtcaccaaggtcacattgaa
ttacctgtcccttgttataatccattgttctttaatcagttatatatttatttgagagca
tcatgtttattctgtcatcacttccgtttgaagtcagtggaggttcatcgttacgcatgt
aagttgagattgttgcaatacggtttgatagacgaatcttacaaattagacgaaataact
ttgggctctcttaatagcagtatatacactggcgatgaagctattgaagataatgaggat
gaaatggatggtgaagaaagtaagcaatcaaaggatatttcctccactcttttaagtgaa
ctgaaaagtaagcgttcagagtttgttgacatggccattgctaaagctctgtcagacggt
agaaccactgagagaggctctttcaccgctactgtaaatgatgaaagaaagaaattggtc
cacgaatttcacaagaagctattatccagaggtaagtgtgataattgtggtatgttttca
ccaaaattcagaaaggatggttttacaaaaatctttgaaactgccttgaatgaaaaacaa
attacaaacaatagggtaaaaggcttcattcgtcaagatatgattaagaagcaaaagcaa
gctaagaaattggatggttctggcgaccaatctacaaatgatgaagagagttttgacgtt
ggtaggaatcctactgctagaccaaggaccggttcaacatatatcttatctactgaagtg
aagaatattttggacactgttttcaggaaagagcaacgtgttttacaatatgtttttcac
tcgagacctaatttatcaagaaaattagtcaaggcagactctttttttatggatgtcatt
gtggttccaccaactagattccgtttgccttctaagcttggtgaagaagttcatgaaaat
tctcaaaaccagttgttgtcaaaggttcttactacgtcattattgattagggacttaaat
gatgatttatctaagctacaaaaggacaaagtttctctggaagatagaagagtgattttc
agtagattaatgaatgcctttgttactattcaaaacgatgtcaatgcttttatcgattct
accaaagcacaaggtagaaccagtggtaaggttccaattcctggtgttaaacaagctctg
gaaaagaaggaaggtctatttagaaaacatatgatgggtaagcgtgttaactacgctgct
cgttctgttatttctccagacccaaatattgaaactaacgaaattggtgtcccacctgtt
tttgctgttaagttgacttacccagaaccggtgacggcttataacatagcagagttgcgt
caagctgttattaatggtcctgataaatggccaggtgccactcagatacagaatgaagat
ggttctttggtttctttgatcggtatgtctgtggagcaacgtaaggcattagctaaccaa
ctgttaacaccatcttcaaacgtttctactcacactttgaacaaaaaggtttatcgtcac
atcaagaacagagacgttgtcttgatgaatcgtcaaccgaccttacataaagcttccatg
atgggtcataaagttagggtgttacccaacgaaaagactttgagattacattatgcgaat
acaggtgcttataatgcagatttcgatggtgatgagatgaatatgcatttcccacaaaat
gaaaatgctagagcagaagcactaaatttagcaaatactgattctcaatacttgacacca
acctccggttctccagttagaggtttgattcaagaccatatttctgctggtgtttggctg
acaagtaaagacagtttcttcaccagagaacaatatcagcaatatatttacggttgcatc
cgtcccgaggacggtcataccacaagatctaagattgttaccttgcctccaaccatcttc
aagccatatccattatggacaggtaaacaaatcatcacaacagtgttgctaaacgttacc
cctccagatatgcctggtatcaatttaatatctaaaaataagatcaagaacgaatattgg
ggtaaaggatctctggaaaacgaagttctcttcaaagacggtgcgttgctatgcggtatt
ttagataagtcacaatacggtgcctccaagtatggtattgttcactcattgcacgaagtt
tacggcccagaagtcgctgcgaaagtcttgtctgttttgggtagactatttaccaattat
attactgctacagcattcacttgtggtatggacgacttgcgtttaacagcagagggtaac
aaatggaggaccgacattttgaagacatctgttgatactggtcgtcaagccgctgcagaa
gtcactaatttagataaagatacaccagcagatgacctagagttattaaagaggctacaa
gaaatactacgtgataataataagtcaggtattcttgatgctgttacatcctccaaggtc
aatgccattacttctcaagtcgtctccaaatgtgttccagatggtactatgaaaaagttc
ccatataattccatgcaagctatggcgctttctggtgctaaaggttctaacgttaatgtt
tctcaaattatgtgtttgttgggtcaacaagctttagagggtagaagagtgccagtaatg
gttagtggtaaaactttgccttctttcaaaccttacgaaacagatgccatggctggtggt
tatgtgaagggtcgtttctactctggtataaaaccacaggagtattatttccattgtatg
gctggtcgtgaaggtttaattgatactgccgtcaagacatctagatccggttacttgcag
cgttgtctgacaaaacaattagagggtgtgcacgtatcttacgataacagtataagagac
gcagatggtactttggtgcagttcatgtatggtggtgatgccatcgacatcaccaaggag
tctcatatgactcaattcgagttctgcttggaaaattactatgcattattaaagaaatat
aacccatcagcactaattgaacatttggatgttgaatcggccttgaagtactccaaaaag
actttgaaatatagaaagaagcatagcaaggagcctcattacaatcagtctataaaatat
gatcctgttttagccaagtataatcctgcgaagtatttgggttctgtttctgagaacttc
caagataaattggagtctttcttggacaagaacaccaaattgttcaaatcagcagatggt
gttaacgaaaagaaattcagggccctgatgcaattgaaatatatgcgttctctaattaat
ccaggtgaagctgttggtattattgcttcgcagtctgtgggtgaaccctcgacacaaatg
acattaaatactttccactttgctggtcacggtgccgctaatgtgacattgggtattcct
cgtttaagagaaatcgttatgactgcttctgcggctattaaaactccacaaatgactttg
cctatttggaatgatgtttctgatgagcaagctgacactttctgtaagtctatttcgaaa
gttctattatctgaagtgatagatagggtgatagtcactgaaactactggtacttcaaat
accgctggtggaagtgccgctcgttcgtatgttattcatatgagattttttgacaacaag
gaatacagtgaagaatacgatgtttccaaagaagaattacaaaatgttatatctaaccaa
tttatacatttgctagaagctgctattgtaaaggaaattaaaaaacaaaagagaactact
ggaccagacgttggtgttgcagtaccaagactacaaacagatgttacaagcagctcttcc
aactctaaaagattggaagaagataatgatgaagaacaaagtcataagaagactaagcaa
gcagtttcgtatgatgagccagatgaggatgaaattgaaactatgagagaagctgaaaaa
tcttctgatgaagaaggtgttgattccgataaagaaagtgattctgactctgatgaggat
gaagacgttgacatgaatgaacaaatcaataagaatattgtggaggctaataataatatg
agcaaagtgcaacgtgatcgtcaatcagctattatttctcatcatagattcatcaccaaa
tacaatttcgatgatgagtcgggtaaatggtgtgaatttaagctagaattagcagccgat
acagaaaagttgttgatggttaacattgtcgaagaaatttgtaggaagtctatcatcaga
caaattcctcatattgatcgttgtgtccatccagaacctgaaaacggaaaacgtgttctt
gtcacagaaggtgttaatttccaagccatgtgggatcaagaggcatttattgacgttgat
ggtattacatccaatgatgttgccgctgtgttgaaaacgtacggtgtagaagctgctaga
aataccattgtgaatgaaatcaataatgttttctctcgttatgctatttctgtttctttc
cgtcatttagaccttattgctgatatgatgaccaggcaaggtacttacctggcctttaac
agacaaggtatggaaacatctacttcatcgtttatgaaaatgtcctatgaaaccacatgt
cagttcttgaccaaagctgttctagataatgagcgtgagcaattagatagtccttctgct
agaattgtggttggtaaattgaacaatgttggtacgggttcattcgatgtgttggcaaag
gttccaaatgctgcttag

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