Saccharomyces paradoxus: SPAR_O04460
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Entry
SPAR_O04460 CDS
T08193
Name
(RefSeq) Rpa190
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPAR_O04460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_O04460
Enzymes [BR:
spao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPAR_O04460
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
SPAR_O04460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
54633875
NCBI-ProteinID:
XP_033769450
UniProt:
A0A8B8V0A7
LinkDB
All DBs
Position
XV:939447..944444
Genome browser
AA seq
1665 aa
AA seq
DB search
MDISKPVGSEITSVDFGILTAKEIRNLSAKQITNPTVLDNLGHPVSGGLYDLALGAFLRN
LCSTCGLDEKFCPGHQGHIELPVPCYNPLFFNQLYIYLRASCLFCHHFRLKSVEVHRYAC
KLRLLQYGLIDESYKLDEITLGSLNSSIYTGDEAIEDNEDEMDGEESKQSKDISSTLLSE
LKSKRSEFVDMAIAKALSDGRTTERGSFTATVNDERKKLVHEFHKKLLSRGKCDNCGMFS
PKFRKDGFTKIFETALNEKQITNNRVKGFIRQDMIKKQKQAKKLDGSGDQSTNDEESFDV
GRNPTARPRTGSTYILSTEVKNILDTVFRKEQRVLQYVFHSRPNLSRKLVKADSFFMDVI
VVPPTRFRLPSKLGEEVHENSQNQLLSKVLTTSLLIRDLNDDLSKLQKDKVSLEDRRVIF
SRLMNAFVTIQNDVNAFIDSTKAQGRTSGKVPIPGVKQALEKKEGLFRKHMMGKRVNYAA
RSVISPDPNIETNEIGVPPVFAVKLTYPEPVTAYNIAELRQAVINGPDKWPGATQIQNED
GSLVSLIGMSVEQRKALANQLLTPSSNVSTHTLNKKVYRHIKNRDVVLMNRQPTLHKASM
MGHKVRVLPNEKTLRLHYANTGAYNADFDGDEMNMHFPQNENARAEALNLANTDSQYLTP
TSGSPVRGLIQDHISAGVWLTSKDSFFTREQYQQYIYGCIRPEDGHTTRSKIVTLPPTIF
KPYPLWTGKQIITTVLLNVTPPDMPGINLISKNKIKNEYWGKGSLENEVLFKDGALLCGI
LDKSQYGASKYGIVHSLHEVYGPEVAAKVLSVLGRLFTNYITATAFTCGMDDLRLTAEGN
KWRTDILKTSVDTGRQAAAEVTNLDKDTPADDLELLKRLQEILRDNNKSGILDAVTSSKV
NAITSQVVSKCVPDGTMKKFPYNSMQAMALSGAKGSNVNVSQIMCLLGQQALEGRRVPVM
VSGKTLPSFKPYETDAMAGGYVKGRFYSGIKPQEYYFHCMAGREGLIDTAVKTSRSGYLQ
RCLTKQLEGVHVSYDNSIRDADGTLVQFMYGGDAIDITKESHMTQFEFCLENYYALLKKY
NPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYNQSIKYDPVLAKYNPAKYLGSVSENF
QDKLESFLDKNTKLFKSADGVNEKKFRALMQLKYMRSLINPGEAVGIIASQSVGEPSTQM
TLNTFHFAGHGAANVTLGIPRLREIVMTASAAIKTPQMTLPIWNDVSDEQADTFCKSISK
VLLSEVIDRVIVTETTGTSNTAGGSAARSYVIHMRFFDNKEYSEEYDVSKEELQNVISNQ
FIHLLEAAIVKEIKKQKRTTGPDVGVAVPRLQTDVTSSSSNSKRLEEDNDEEQSHKKTKQ
AVSYDEPDEDEIETMREAEKSSDEEGVDSDKESDSDSDEDEDVDMNEQINKNIVEANNNM
SKVQRDRQSAIISHHRFITKYNFDDESGKWCEFKLELAADTEKLLMVNIVEEICRKSIIR
QIPHIDRCVHPEPENGKRVLVTEGVNFQAMWDQEAFIDVDGITSNDVAAVLKTYGVEAAR
NTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQGMETSTSSFMKMSYETTC
QFLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVPNAA
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggatatttctaaaccggttggttctgaaatcacatccgttgatttcgggatcctaaca
gctaaagagattagaaatctatcagcaaagcaaattaccaatccaacggttttagataac
ttgggtcatccagtatcgggcggtttatatgacttagccttaggtgcattcttaaggaat
ttgtgttcaacttgtggtttggatgaaaaattttgtcctggtcaccaaggtcacattgaa
ttacctgtcccttgttataatccattgttctttaatcagttatatatttatttgagagca
tcatgtttattctgtcatcacttccgtttgaagtcagtggaggttcatcgttacgcatgt
aagttgagattgttgcaatacggtttgatagacgaatcttacaaattagacgaaataact
ttgggctctcttaatagcagtatatacactggcgatgaagctattgaagataatgaggat
gaaatggatggtgaagaaagtaagcaatcaaaggatatttcctccactcttttaagtgaa
ctgaaaagtaagcgttcagagtttgttgacatggccattgctaaagctctgtcagacggt
agaaccactgagagaggctctttcaccgctactgtaaatgatgaaagaaagaaattggtc
cacgaatttcacaagaagctattatccagaggtaagtgtgataattgtggtatgttttca
ccaaaattcagaaaggatggttttacaaaaatctttgaaactgccttgaatgaaaaacaa
attacaaacaatagggtaaaaggcttcattcgtcaagatatgattaagaagcaaaagcaa
gctaagaaattggatggttctggcgaccaatctacaaatgatgaagagagttttgacgtt
ggtaggaatcctactgctagaccaaggaccggttcaacatatatcttatctactgaagtg
aagaatattttggacactgttttcaggaaagagcaacgtgttttacaatatgtttttcac
tcgagacctaatttatcaagaaaattagtcaaggcagactctttttttatggatgtcatt
gtggttccaccaactagattccgtttgccttctaagcttggtgaagaagttcatgaaaat
tctcaaaaccagttgttgtcaaaggttcttactacgtcattattgattagggacttaaat
gatgatttatctaagctacaaaaggacaaagtttctctggaagatagaagagtgattttc
agtagattaatgaatgcctttgttactattcaaaacgatgtcaatgcttttatcgattct
accaaagcacaaggtagaaccagtggtaaggttccaattcctggtgttaaacaagctctg
gaaaagaaggaaggtctatttagaaaacatatgatgggtaagcgtgttaactacgctgct
cgttctgttatttctccagacccaaatattgaaactaacgaaattggtgtcccacctgtt
tttgctgttaagttgacttacccagaaccggtgacggcttataacatagcagagttgcgt
caagctgttattaatggtcctgataaatggccaggtgccactcagatacagaatgaagat
ggttctttggtttctttgatcggtatgtctgtggagcaacgtaaggcattagctaaccaa
ctgttaacaccatcttcaaacgtttctactcacactttgaacaaaaaggtttatcgtcac
atcaagaacagagacgttgtcttgatgaatcgtcaaccgaccttacataaagcttccatg
atgggtcataaagttagggtgttacccaacgaaaagactttgagattacattatgcgaat
acaggtgcttataatgcagatttcgatggtgatgagatgaatatgcatttcccacaaaat
gaaaatgctagagcagaagcactaaatttagcaaatactgattctcaatacttgacacca
acctccggttctccagttagaggtttgattcaagaccatatttctgctggtgtttggctg
acaagtaaagacagtttcttcaccagagaacaatatcagcaatatatttacggttgcatc
cgtcccgaggacggtcataccacaagatctaagattgttaccttgcctccaaccatcttc
aagccatatccattatggacaggtaaacaaatcatcacaacagtgttgctaaacgttacc
cctccagatatgcctggtatcaatttaatatctaaaaataagatcaagaacgaatattgg
ggtaaaggatctctggaaaacgaagttctcttcaaagacggtgcgttgctatgcggtatt
ttagataagtcacaatacggtgcctccaagtatggtattgttcactcattgcacgaagtt
tacggcccagaagtcgctgcgaaagtcttgtctgttttgggtagactatttaccaattat
attactgctacagcattcacttgtggtatggacgacttgcgtttaacagcagagggtaac
aaatggaggaccgacattttgaagacatctgttgatactggtcgtcaagccgctgcagaa
gtcactaatttagataaagatacaccagcagatgacctagagttattaaagaggctacaa
gaaatactacgtgataataataagtcaggtattcttgatgctgttacatcctccaaggtc
aatgccattacttctcaagtcgtctccaaatgtgttccagatggtactatgaaaaagttc
ccatataattccatgcaagctatggcgctttctggtgctaaaggttctaacgttaatgtt
tctcaaattatgtgtttgttgggtcaacaagctttagagggtagaagagtgccagtaatg
gttagtggtaaaactttgccttctttcaaaccttacgaaacagatgccatggctggtggt
tatgtgaagggtcgtttctactctggtataaaaccacaggagtattatttccattgtatg
gctggtcgtgaaggtttaattgatactgccgtcaagacatctagatccggttacttgcag
cgttgtctgacaaaacaattagagggtgtgcacgtatcttacgataacagtataagagac
gcagatggtactttggtgcagttcatgtatggtggtgatgccatcgacatcaccaaggag
tctcatatgactcaattcgagttctgcttggaaaattactatgcattattaaagaaatat
aacccatcagcactaattgaacatttggatgttgaatcggccttgaagtactccaaaaag
actttgaaatatagaaagaagcatagcaaggagcctcattacaatcagtctataaaatat
gatcctgttttagccaagtataatcctgcgaagtatttgggttctgtttctgagaacttc
caagataaattggagtctttcttggacaagaacaccaaattgttcaaatcagcagatggt
gttaacgaaaagaaattcagggccctgatgcaattgaaatatatgcgttctctaattaat
ccaggtgaagctgttggtattattgcttcgcagtctgtgggtgaaccctcgacacaaatg
acattaaatactttccactttgctggtcacggtgccgctaatgtgacattgggtattcct
cgtttaagagaaatcgttatgactgcttctgcggctattaaaactccacaaatgactttg
cctatttggaatgatgtttctgatgagcaagctgacactttctgtaagtctatttcgaaa
gttctattatctgaagtgatagatagggtgatagtcactgaaactactggtacttcaaat
accgctggtggaagtgccgctcgttcgtatgttattcatatgagattttttgacaacaag
gaatacagtgaagaatacgatgtttccaaagaagaattacaaaatgttatatctaaccaa
tttatacatttgctagaagctgctattgtaaaggaaattaaaaaacaaaagagaactact
ggaccagacgttggtgttgcagtaccaagactacaaacagatgttacaagcagctcttcc
aactctaaaagattggaagaagataatgatgaagaacaaagtcataagaagactaagcaa
gcagtttcgtatgatgagccagatgaggatgaaattgaaactatgagagaagctgaaaaa
tcttctgatgaagaaggtgttgattccgataaagaaagtgattctgactctgatgaggat
gaagacgttgacatgaatgaacaaatcaataagaatattgtggaggctaataataatatg
agcaaagtgcaacgtgatcgtcaatcagctattatttctcatcatagattcatcaccaaa
tacaatttcgatgatgagtcgggtaaatggtgtgaatttaagctagaattagcagccgat
acagaaaagttgttgatggttaacattgtcgaagaaatttgtaggaagtctatcatcaga
caaattcctcatattgatcgttgtgtccatccagaacctgaaaacggaaaacgtgttctt
gtcacagaaggtgttaatttccaagccatgtgggatcaagaggcatttattgacgttgat
ggtattacatccaatgatgttgccgctgtgttgaaaacgtacggtgtagaagctgctaga
aataccattgtgaatgaaatcaataatgttttctctcgttatgctatttctgtttctttc
cgtcatttagaccttattgctgatatgatgaccaggcaaggtacttacctggcctttaac
agacaaggtatggaaacatctacttcatcgtttatgaaaatgtcctatgaaaccacatgt
cagttcttgaccaaagctgttctagataatgagcgtgagcaattagatagtccttctgct
agaattgtggttggtaaattgaacaatgttggtacgggttcattcgatgtgttggcaaag
gttccaaatgctgcttag
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integrated database retrieval system