Stenotrophomonas pavanii: STNY_R28190
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Entry
STNY_R28190 CDS
T07567
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00020
Citrate cycle (TCA cycle)
spaq00785
Lipoic acid metabolism
spaq01100
Metabolic pathways
spaq01110
Biosynthesis of secondary metabolites
spaq01120
Microbial metabolism in diverse environments
spaq01200
Carbon metabolism
spaq01210
2-Oxocarboxylic acid metabolism
Module
spaq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spaq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STNY_R28190
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
STNY_R28190
Enzymes [BR:
spaq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
STNY_R28190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
BCX44612
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All DBs
Position
3046350..3049181
Genome browser
AA seq
943 aa
AA seq
DB search
MDNQLKQFAQSSQLAGGNASYVEDLYEQYLVSPDSVDPKWKTYFDGFKGREAGDIPHSAV
ISHIADAAKDALKAGTGTGAGDERERNVGRLITAYRSRGHLDARLDPLGLAAPVNTPDLG
LAFHSLSDADLNSEFSTGGVGGQPRMKLRDLLARLKATYTGSIGAEFMHISEVEQRQWIY
KKLEAAGGNYQLDADTQRRTLERLTAAEGLERYLHTKYVGQKRFSLEGGDSLIPMMDTII
RNAGKDGVKDVVIGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHDEHASAGDVKYHMGF
SADVATDGGPVHLALAFNPSHLEIADPVVAGSVRSRQERRKDTARKQVMPILIHGDAAFS
GQGVVMELFQMSQARGFAVGGTVHIVVNNQVGFTTSNPLDTRSTRYATDVAKMIAAPVLH
VNGDDPEAVVFAAQLAFEFRQTFAKDVVIDLMCYRRWGHNEADEPAITQPLMYQVIRKHP
TTREMYAEQLEKAGVIAAGAGKAMVDAYREKLDAGEVTTELAKVEKTPPSSPLFVDWPKL
LEGKLSDPVSTKVEKNKLVELAKLINTIPDEVQLHSRVAKVYDDRRKMAAGEIPGDWGFA
ENLAYATLLDEGHALRLVGQDVGRGTFTHRHAILHDQKTDNYYMPLRQLVDSPEKATVID
SLLSEEAVMAYEYGFSTTDPNTLCIWEGQFGDFANGAQVVIDQFIAAGEAKWGRISGLTL
LLPHGYEGQGPEHSSARLERFLQLCALENMLVVVPSTPAQAFHMLRRQLHMTTRKPLVVM
SPKSLLRHKLAVSTLDELANGEFQHLIGDANADAKKVKRVVLCSGKVYYDLLEDQIKRGQ
DDVAIIRVEQLYPFPRALLAAELKKYGKATDVVWTQEEPQNQGAWYQIRHHLQFCLADGQ
NLHYAGRARSASPAAGHMADHVREQQQLIADALVNPFNDQVAE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatcaactgaagcagtttgcgcaatcttcgcaactcgccggcggcaacgcctcc
tatgtcgaggacctgtacgagcagtacctggtctccccggatagtgtcgatcccaaatgg
aaaacctactttgacggcttcaagggccgcgaagcaggtgacattccgcactcggccgtc
atctcccacatcgcggacgcggccaaggatgcgctgaaagctggcaccggcaccggtgcg
ggcgacgagcgcgagcgcaatgtcggtcgtctgatcaccgcctaccgctcgcgcggccac
ctggacgcccgccttgatccgctgggcctggccgcgccggtcaacacgcccgacctgggc
ctggcgttccacagcctgtccgatgccgacctcaacagcgagttcagcaccggcggcgtc
ggcggccagccgcgcatgaagctgcgcgacctgctggcacgcctgaaggcgacctacacc
ggctcgatcggtgcggagttcatgcacatctccgaggtcgagcagcgccagtggatctac
aagaagctggaagccgccggtggcaactaccagctggacgctgacacccagcgccgcacc
ctggagcgcctgactgcggccgaaggcctggagcgctacctgcacaccaagtacgtcggc
cagaagcgcttctcgctggaaggcggcgattcgctgatcccgatgatggacaccatcatc
cgcaacgccggcaaggatggcgtcaaggatgtggtgatcggcatggcccaccgtggccgc
ctgaacgtgctggtcaacaccctgggcaagaacccgcgcaagctgttcgacgagttcgaa
ggcaagttcgagcacgacgagcacgcctcggccggcgacgtgaagtaccacatgggcttc
tccgccgacgtcgccaccgatggcggcccggtgcacctggcgctggcgttcaacccgtcg
cacctggaaatcgccgacccggtcgtggccggctccgtgcgttcgcgccaggagcgccgc
aaggacaccgcgcgcaagcaggtcatgccgatcctgatccacggcgacgcggccttctcc
ggccagggcgtggtcatggaactgttccagatgtcgcaggcccgcggcttcgccgtcggc
ggcaccgtgcacatcgtggtcaacaaccaggtcggcttcaccacctccaacccgctggat
acgcgttccacgcgctatgccaccgacgtggcgaagatgattgccgccccggtgctgcac
gtgaacggcgatgacccggaagcggtggtgttcgccgcacagctggccttcgagttccgc
cagacgttcgccaaggacgtggtcatcgacctgatgtgctaccgccgctggggccacaac
gaggccgacgaaccggcgatcacccagccgttgatgtaccaggtgatccgcaagcacccg
accacccgcgagatgtacgccgagcagctggaaaaggcgggcgtgatcgccgccggcgcc
ggcaaggcgatggtcgatgcctaccgcgagaagctggacgccggtgaagtgaccaccgag
ctggccaaggtcgagaagaccccgccgagcagcccactgttcgtcgattggccgaagctg
ctggaaggcaagctgtccgacccggtctcgaccaaggtcgagaagaacaagctggtcgag
ctggccaagctgatcaacaccattcccgatgaagtgcagctgcactcgcgcgtggccaag
gtctatgacgaccgccgcaagatggccgccggcgagatcccgggcgactggggctttgcc
gagaacctggcctacgccaccctgctcgacgaaggccatgcgctgcgcctggtcggccag
gacgtcggccgcggtaccttcacgcaccgccacgcgatcctgcacgaccagaagaccgac
aactactacatgccgctgcggcagctggtggattcgccggagaaggccaccgtcatcgat
tcgctgctgagcgaagaagcggtgatggcctacgagtacggcttctccaccaccgatccg
aacacgctgtgcatctgggaaggccagttcggcgacttcgccaacggtgcccaggtggtg
atcgaccagttcatcgccgccggtgaagccaagtggggccgcatttccggcctgaccctg
ctgctgccgcatggctatgaagggcaaggcccggaacacagctcggcgcgcctggagcgc
ttcctgcagctgtgcgcgctggagaacatgctggtggtggtgccgtcgaccccggcccag
gccttccacatgctgcgtcgccagctgcacatgaccacccgcaagccgctggtggtgatg
tcgccgaagtcgctgctgcgccacaagctggccgtgtcgaccctggacgagctggccaac
ggcgagttccagcacctgatcggcgatgccaacgcagacgccaagaaggtcaagcgcgtg
gtgctgtgctcgggcaaggtctattacgacctgctggaggaccagatcaagcgcggccag
gacgacgtggcgatcatccgcgtggagcagctgtatccgttcccgcgtgcgctgctggcg
gccgaactgaagaagtacggcaaggccaccgacgtggtgtggacgcaggaagaaccgcag
aaccagggcgcgtggtaccagatccgccaccacctgcagttctgcctggccgatggccag
aacctgcactacgccggtcgcgcacgttcggcctcgccggctgccggtcacatggctgac
cacgtccgcgagcagcagcagctgatcgccgacgcactggtcaacccgttcaacgaccag
gtcgctgaataa
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