Saprolegnia parasitica: SPRG_07880
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Entry
SPRG_07880 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
spar
Saprolegnia parasitica
Pathway
spar03008
Ribosome biogenesis in eukaryotes
spar03013
Nucleocytoplasmic transport
spar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_07880
03008 Ribosome biogenesis in eukaryotes
SPRG_07880
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SPRG_07880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_07880
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_07880
03016 Transfer RNA biogenesis [BR:
spar03016
]
SPRG_07880
03036 Chromosome and associated proteins [BR:
spar03036
]
SPRG_07880
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SPRG_07880
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
SPRG_07880
Pre-60S particles
SPRG_07880
Transfer RNA biogenesis [BR:
spar03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SPRG_07880
Chromosome and associated proteins [BR:
spar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
SPRG_07880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
BID
DUF3385
Motif
Other DBs
NCBI-GeneID:
24130130
NCBI-ProteinID:
XP_012202542
UniProt:
A0A067C835
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MEQVGAKLMDMSIPLDVAALDEVVMCMQNPNSPHIAIANQIMVAFQNHQDSWTRVSQILE
TSTYQPTKYFGLQVLEDAIKYRWFAMPKDQREGIKQYIVGKILTMSADEATLRKERLFIN
KMNLVLVQVLKHEWPQNWPSFITDICTSSQTSEVLCENNMLILKLLSEEIFDFSKDQMTE
KKTKGLKESLNHEFIQIFKLCEFVLDKSTHIPLLTITLQTLLRFLSWIPLGFVFETSLIE
TLVKKFLGTPAFRNDTIACLSEIANLSDVPPSYDAVFVQMYIGVLTELTRLVPVGQSFER
IYNHDSVFVQGLSLFFTNFFRHRIQVIERPIVRANDEAHVALLTGFSYLVSISEVDDDNI
FKICLDYWHLFTRDLYAVDQNQMQQQSHHSSSVLSLSSKREDEPITRKGLLAPILSRVRV
VMISKMVKPSEVLIVEDENGEIVRETTKDTEALSQYKTMHEGLVYLTHLDYDDTENIMLE
KLTDQVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKA
VVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKISQKCRRK
FVVLQPAEPYPFVEELLMDLPKTVSDLQTHQLHTFYEAVASMLAAENVPARKDTLLAELM
KLPNQAWTSIMQQAAQNVEILFDSTVVKEIVKIIRTNGNVCKAIGPNGFNSQMGQIFQDL
LNVYRTYTHRIAMAVQQGGETATKSSEVRLLRSAKKESLRLFEAFIEHSSADETGRKTLS
HHFLPALLEVVLSDYKTTVPSAKEAEVLTLLAMTLNKLKASIAPSAPSMLEAVFECTLQM
ITRNFEDFPEHRVNFFKLLKAVNDYCFEALFTIPPEHQKLVVDSIVWAFKHTERNVADTG
LETLYALLLNVRESPVIAASFYRSFYLSLLQDILVVLTDRLHKFGFKMHAAILRHMFTIV
ESNQVAIPLWESLPNPPQMGPNQTNAAFLKEYVANMIGTSFPNMSSNQVRLFVVGCFDLG
KDLAHFKKHLRDFLVNVKEFAGEDNADLFLEESLAMTQQQLEMERASRLAVPGLIHPSER
PDDMSDL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagtcggcgccaagttgatggacatgagcatcccgctcgacgttgcagccttg
gacgaggtcgtcatgtgcatgcagaaccccaacagcccccacattgcgatcgccaaccag
atcatggtggccttccagaaccaccaggactcgtggacccgcgtctcgcagatcctcgag
acgtcgacgtaccagccgaccaagtactttggtctccaggtgctcgaagatgcgatcaag
tacagatggttcgccatgcccaaggaccagcgggaaggcatcaagcagtacattgtcggc
aagatcctcacgatgtcggcggacgaggccacgctgcgcaaggaacgcctcttcatcaac
aagatgaacctcgtgctcgtccaggtgctcaagcacgagtggccgcagaactggccgtcg
ttcatcacggacatttgcacgtcgagccagacgtcggaagtgctttgcgagaacaacatg
ctcatcctcaagctcctcagcgaagagattttcgacttttccaaggaccagatgacggag
aagaagaccaagggtctcaaggagagcctcaaccacgagtttatccagatcttcaagctc
tgcgagtttgtcctggacaagtcgacgcacatcccgctgctcacgatcacgctccagacg
ctgctccggttcctctcgtggatcccgctcggctttgtgtttgagacgtcgctcatcgag
acgctcgtcaagaagtttctcgggacgccggccttccgcaacgacacgattgcgtgcttg
agcgagattgccaacctcagcgacgtgccgccgtcgtacgacgcggtctttgtgcagatg
tacattggcgtcctcacggagctcacgcgcctcgtgcccgtcggccagtcgttcgagcgc
atctacaaccacgacagcgtctttgtgcaaggcctctcgctcttcttcaccaactttttc
cgccaccggatccaggtcattgagcgtccgatcgtccgcgccaacgacgaagcgcacgtg
gcgctcctcacgggcttttcgtacctcgtgtcaatctccgaagtcgacgacgacaacatc
ttcaagatctgcctcgactactggcacctctttacgcgcgacttgtacgcggtggaccaa
aaccagatgcagcagcagtcgcaccatagcagctcggtgctctcgctctcgtccaagcgc
gaggacgagccgatcacgcgcaagggcctcttggcgccgatcctctcgcgcgtccgcgtc
gtcatgatctccaagatggtcaagccctccgaggtgctcatcgtcgaggacgagaacggc
gagattgtgcgcgagacgaccaaggacacggaggcgctttcgcagtacaagacgatgcac
gaaggcctcgtgtacctcacgcacctcgactatgacgacacggagaacatcatgctcgag
aagctcacggaccaagtcgagggcaacggctggtcgtggaacaacctcaacacgctctgc
tgggcgatcgggtccatttccggcgcgatgagcgaagagaacgagaagcgtttcctcgtc
acggtcatcaaggacctcctcgggctctgcgagatgaagcgcggcaaggacaacaaggcg
gttgtcgcctccaacatcatgtacgtggtcggccagtacccgcgcttcctccgcgcgcac
tggaagttcctcaagacggtcgtcaacaagctctttgagtttatgcacgagctgcacccg
ggcgtccaggacatggcctgcgacacgtttcttaagatttcgcaaaagtgccggcgcaag
tttgtcgtgctccagcccgccgagccgtacccgtttgtggaggagctcctcatggacttg
cccaagacggtgagcgacctccagacgcaccagctgcacacgttttacgaggccgtcgcg
tcgatgctggccgccgagaacgtgcccgcgcgcaaggacacgctcctcgccgagctcatg
aagctcccgaaccaggcgtggaccagcatcatgcagcaggcggcgcagaacgtcgagatc
ctctttgacagcacggtcgtcaaggagattgtcaagattatccgcacgaacggcaacgtg
tgcaaggcgattgggcccaacggcttcaactcgcagatgggccagatcttccaggacctc
ctcaacgtctaccgcacgtacacgcaccgcattgcgatggcggtgcagcagggcggcgaa
accgcgaccaagtcgtcggaggtccgccttctgcgctcggccaagaaggagagcctgcgc
ctctttgaggcctttatcgagcactcgtcggcggacgagacgggccggaagacgctgtcg
caccactttttgcccgcgctcctcgaggtggtcctctcggactacaagacgacggtgccg
agcgcgaaggaggcagaagtgctcacgctcctcgcgatgaccctcaacaagctcaaggcg
tcgatcgcgccgtcggcgccgagcatgctcgaagcagtgttcgagtgcacgctgcagatg
attacgcgcaactttgaggactttcccgagcaccgcgtcaactttttcaagctgctcaag
gccgtcaacgactactgctttgaagcgctctttacgatcccgcccgagcaccaaaagctg
gtcgtcgactcgatcgtctgggccttcaagcacacggagcgcaacgtcgcagacacgggc
ttggaaacgctgtacgcgctcctcctcaacgtgcgcgagagccctgtgatcgcggcgagc
ttttaccggtcgttttacctctcgctgctccaggacatccttgtcgtgctcacggaccgc
ctgcacaagtttggcttcaagatgcacgcggcgatcttgcgccacatgtttacgatcgtc
gagtccaaccaggtggcgatcccgctctgggagtcgctcccgaacccgccgcaaatgggc
ccgaaccagacgaacgcagccttcctcaaggagtatgtggccaacatgattggcacgtcg
ttccccaacatgtcgtcgaaccaagtgcggctctttgtcgtcggctgctttgacctcggg
aaggacctcgcgcactttaagaagcacctgcgcgacttcctcgtcaacgtcaaggagttt
gcgggcgaagacaacgccgaccttttcttggaagagagcctcgcgatgacgcagcagcag
ctcgagatggagcgcgcgtcgcgcctcgccgtgcccggcctcatccacccgagcgaacgc
cccgacgacatgtcggacctctag
DBGET
integrated database retrieval system