Solanum pennellii: 107007517
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Entry
107007517 CDS
T04130
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
spen
Solanum pennellii
Pathway
spen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107007517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107007517
Enzymes [BR:
spen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107007517
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107007517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
107007517
NCBI-ProteinID:
XP_015061653
LinkDB
All DBs
Position
1:91415611..91431698
Genome browser
AA seq
1184 aa
AA seq
DB search
MGEEKPKSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIV
DSFSSLKLRIWFGKPELFPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDG
AVIREKFNFGQFPIMLKSKLCHLRGADDSKKLIAYKEEPSEMGGYFILKGLERVIRLIIL
PKRNYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGRE
YLLPVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSL
FTRAQCLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYVFVHLDNNHDKFNLLIFMLQKLF
SLIDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELS
SLTDVKKAIEKNAPKQIGLVIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHF
RAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGN
VKDFFKMRMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHL
RRLKLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELI
GPFEQVYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQ
MGKQTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSG
YDMEDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDS
DGLPYVGQRINPNEPYCSIYNEITSQTTSMKLKGSEPVVVDYVAVDVKNKAHLQKANIRF
RRSRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLL
ESIAAKGGALHGKFVDATPFSNTMKESESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVY
GTELTCRIFIGPVYYQRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDS
LLAHGAAYLLHDRLHTSSDHHIADVCSECGSVLTSSVIQPPKRAVQAILKQLPAREPKKV
TCVACRSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNEAGA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaaaagccaaaatccgatggaagcaaggccatgtcacggccgcatttggtg
gcagagaaagattactcagctttgaaagagcttttcagtcatcatattgaatcatttgat
tatatggtcgataatggacttgaaaccatgctcttgaatatcaagcctattgaaattgtt
gattccttttcctcgctcaagctaagaatctggttcggcaaacctgaattattcccacct
caaaaagaacgcgcttccaaggccatgcatgatgctttatatccttttgagtgtagacaa
gctaaaatttcatattcaggaaagtttttggtggatatctgtttccagtatggtgatgga
gctgtaattcgggagaaatttaattttggacagttccctatcatgttgaagtcaaagcta
tgtcacttgagaggtgctgatgactccaagaagttaattgcttacaaggaagagccatca
gaaatgggcggatatttcattcttaaagggcttgagagagttattcgtcttataattttg
ccaaagcgaaactatccaacgagtatggcacggaattcatttcgtgataggcgagaagga
tattctgataaagctgttgttataagatgtgtaagggaagatcaatctgcagtctcactt
aaattgtattatctaaacaatggaagtgcaagacttggattctggatacaaggaagggaa
tacttgcttcctgttggtatcatcttaaaggcccttgttgacaccactgatcacgagata
tacgtcaatttaacatgttgctacaatgaggaatgtgaccgtgtaaagggatctgtcggc
acccagcttgttggtgaaagagcaaaaattatcctggatgaagttcaggccctatctctt
tttacccgagcacagtgcctgcgacatattggggagcatttccaacctgttgtgattgga
atgcaaaatgatagttacaaaactgttgctgatgctgtgcttagagactacgtatttgtc
catctggataacaatcatgataaatttaatctacttatctttatgttgcagaagcttttc
tctctgatagatcagacttctgtcctagacaatccagactctctgcaaaatcaagaagtt
ttgctgccgggtcacttaattaccatatatctgaaggaaaagctacaagattggctactt
aaattacaacggtcacttcaggaagaaactgatggtgaaaaaaagaagtttgagctaagt
agcttgacagacgtcaagaaggctattgaaaaaaatgctcccaaacagattggcttggtt
attgagagcatgttgaagactgggagattggctacacaatcaggtcttgatttgcaacag
agagctggaatgactgtccaggcagaaaagttaaatttcctccgttttctttcacatttt
cgagcggttcatcgaggtgcctcatttgctggtcttcgtactacaagtgtgcggaagttg
ttacctgaatcttggggtttcctttgtcctgttcacacacctgatggggagccatgtggg
ttgcttaatcatatgactgcatcttgccgcataacctcatactatgattcaaagggcaat
gttaaagacttcttcaaaatgcggatgtccatattgaatgtgctgattgcaattggaatg
acaccatcatcaccaaagcttgtgcaagctggtcctcctgaattgctgtctgtcctactg
gatggtcgtattgcgggctatataccgtcggatttaattgaaaaagctgttacccacttg
cggagattgaaattgtcatcaacatcatcgattccagttgatttggaggttggatacatc
cctttgagcatgaatggagcatatccaggcctatatctgttcacatctccttctaggttt
gttcgtcccgtaagaaacatctctgcgcctgctgaagagggcaatgatcttgaactcatt
ggaccctttgaacaggtgtatatggagataagctgcccggatggaggagatggaggaagg
aaaaccttattccctgccacacatcgagaaattcatccaactaatattttgagtgttgtt
ggcaatcttacaccttggtctgatcataatcagagtccacgtaatatgtatcaatgtcag
atgggtaaacaaacaatgggtttctcctcacaagcattaaattgtcgtgctgatcaaaag
ttatatcaccttcagactcctcaaaccccaattgtacgcacaaaagcttatgagaagtac
tgtgttgatgactatccattaggaacaaatgcaattgtggcagttttggcttattcagga
tatgacatggaagacgctatggtcttaaataaatcatctgtagatcgtggtatgtgtcat
gggcatatataccagacagaaaccattgacttgactgagcaaagcgccaaatctgatcgt
gctcagagattgtttagaagaagcaatttggataagtcgtctcatcagctgattgattct
gatggtcttccatacgtgggacagaggattaatccaaatgagccatattgtagcatttac
aatgaaataaccagtcagacaactagtatgaagttgaagggttcggagcctgttgttgtt
gattatgttgctgtcgatgtgaaaaataaagcacatctgcagaaggcgaatatacgtttt
aggcgctccaggaatcctgtaattggtgataaatttagcagccgacatgggcaaaagggt
gtttgctctcaattatggcctgatgtcgatatgcccttctcagcagttacaggaatgagg
ccagatcttattattaatcctcatgctttcccttcaaggatgacaattgctatgctgttg
gagtcaattgctgctaagggaggtgctttacatgggaagtttgttgatgcaacgccgttc
tctaacacaatgaaggaatcagaatcggaatccagttcactggtggatgaccttggttcc
atgttagcggtttgtggcttcaatcaccatggtacggaagtactatatagtggagtatat
gggacagaactgacttgtcgaatatttattggacctgtttattatcagcgtctgcgacac
atggtttctgataaatttcaggtccgttctactggacaggtagaccatatcactcggcag
cctatcaaggggagaaagcgtggtggaggtgtccgctttggtgaaatggaacgagattca
ctccttgctcatggagcagcatatttgctgcatgatagactccatacaagctcagatcat
cacattgcagatgtgtgctctgaatgtggaagtgtcctaacatcatctgttattcagccg
ccaaaacgagcagtgcaagcaattctgaaacagctacctgctagagaacccaaaaaggtt
acttgtgtcgcttgtcgttcaagtaaaggaatggagactgttgctatgccttatgtgttt
aaatatttagcggctgaactggcagccatgaacatcaagatgaccctcaaactaagtaat
gaggctggagcttga
DBGET
integrated database retrieval system
