Solanum pennellii: 107023295
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Entry
107023295 CDS
T04130
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
spen
Solanum pennellii
Pathway
spen00052
Galactose metabolism
spen00511
Other glycan degradation
spen00531
Glycosaminoglycan degradation
spen00600
Sphingolipid metabolism
spen00604
Glycosphingolipid biosynthesis - ganglio series
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
107023295
09103 Lipid metabolism
00600 Sphingolipid metabolism
107023295
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107023295
00604 Glycosphingolipid biosynthesis - ganglio series
107023295
00511 Other glycan degradation
107023295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107023295
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
107023295
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107023295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
107023295
NCBI-ProteinID:
XP_015079424
LinkDB
All DBs
Position
6:complement(49783122..49795777)
Genome browser
AA seq
714 aa
AA seq
DB search
MTTTLKKNGISSFRAVGLRFRAAAMAKKRRVGTTIFMLLLALLAFGAFAPAFAPLPSLSS
FSSRSDIARLNSMGDKNKFEIADDMFWKDGKPFQIIGGDLHYFRVLPEYWEDRLLRAKAL
GLNTIQTYVPWNLHEPREGQLVFKGIADIFSFLNLCQKLDLLVMLRVGPYICAEWDFGGF
PAWLLAIEPAVRLRSSDPAFINLVERWWGILLPKIVSYAYKNGGPIIMVQIENEFGSYGD
DKAYLHHLVRIARGHLGDDVILYTTDGGSRENLNKGTIPGDAVFSAVDFSTGDDPWPNFK
LQKEFNAPGKSPPLSTEFYTGWLTHWGEHIANTDATVTASYLERILSKNGSAVLYMAHGG
TNFGFYSGANTGADETDYKPDLTSYDYDAPIKESGDIDNPKYQALRRVIAKYTAVPLPSV
PSNTEKKAYGLIKLQKTKSLFNIVDTTYFDGVTESENPLAMESLDQMFGFMLYVSDYKAK
ANGGLLFIPKVHDRAQVFISCPSDNYDENPKYVGTVARWSNTSIRLPHTQCTSDNRIYIL
VENMGRINYGKYIFDKKGILSPVYLDGKPLQKWKMLPIPFHNLNEDQNNNSVISDAYADL
RESVQIKLENKRNYHPVPAFYTGHLTVDEVKDTFLSFRGWSKGVAIINGFNLGRFWPSFG
PQCNLYVPAPILQVGKNLVVILELEAPNAELFVTSVDHPDFTCGSSANSRVHQI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacactgaagaaaaacggcatttccagtttccgagcagtgggattgagattc
cgagcagcggcaatggcgaaaaaacgacgcgtcggaacgacgatcttcatgctcctctta
gctctcttagcattcggagctttcgcacctgcctttgctccgcttccttctctatcatct
ttttcttcccgttccgacatcgctagacttaattctatgggtgataagaacaaatttgag
attgcggatgatatgttctggaaagatggaaagccttttcagatcattggcggggacttg
cactattttcgggttcttccagagtactgggaagatcgactcctgagagcaaaggcatta
ggcttgaataccattcaaacatatgtcccatggaatttgcacgaaccaagggaaggtcaa
cttgtttttaaaggaatagcagatatcttttcattcctcaatctatgtcagaaattggat
ctcctagtgatgctccgagttgggccttatatttgtgcagagtgggattttgggggtttc
cctgcttggttacttgccattgaacctgctgtaagacttagatcatcagatcctgctttc
attaatttggttgaaagatggtggggaattttgctgccgaagatagtctcttatgcttac
aaaaatggcggccctattataatggttcagatagaaaatgaatttggttcatacggagat
gacaaggcctacctgcatcacttagtgaggatagcccgtggacaccttggagatgatgtt
attctatatacgaccgatggaggttcaagagaaaatcttaacaaagggactattcctgga
gatgctgtcttttcagctgttgatttttcaacgggagatgatccatggcccaattttaag
ttgcagaaagagttcaatgcaccagggaaatcaccaccgctttcaacggagttctacact
ggttggctcacgcactggggagagcatattgcaaatactgatgcaactgttacagcatct
tacttagaaaggatcttgtcaaaaaatggatcagctgtgctctacatggcacatggtgga
acaaatttcgggttctatagtggtgcaaatactggtgcagatgagactgattacaagcct
gatcttacatcctatgattatgatgcacctatcaaagaatctggagatatagacaatcca
aaatatcaagctcttcgaagggtgattgctaaatatactgcagtgcctcttccttcagtt
ccttccaatactgaaaagaaagcatatggacttattaagttgcagaagactaaatcattg
tttaacatagttgataccacatactttgatggtgtcactgaatctgaaaacccacttgca
atggagtctttggaccagatgtttggcttcatgctttatgtttctgattacaaagcaaaa
gctaatggaggtttgttattcataccaaaggtgcatgacagggcacaagtattcatttca
tgcccttcagacaactatgacgaaaatccaaaatatgtaggcactgtagctagatggtca
aatacttccatcaggcttcctcatactcaatgtacttcagataacagaatttatatactg
gtggaaaatatggggcgtataaattatgggaaatacatttttgacaagaagggtatactc
tctcctgtttatttagatggtaaaccattgcagaagtggaaaatgttgccgattcctttt
cacaacctaaatgaggaccaaaacaataattctgttatttcagatgcatacgccgacctt
agagaatctgtgcagataaaactggaaaacaaaagaaattatcatccagtgccagctttc
tacactggtcatcttacagttgatgaagtaaaagacacttttttgtcttttcgtggctgg
agtaaaggggttgcaattatcaatggatttaatttaggaaggttttggccgtcctttgga
ccccagtgcaacctttatgttcctgctccaatcctgcaagtaggaaaaaatctcgtggtt
attctcgaattagaggctccgaatgctgagttgtttgtgacctcagttgaccatccagat
ttcacatgtggttcttccgcaaattcacgagtgcatcaaatctga
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