Solanum pennellii: 107023679
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Entry
107023679 CDS
T04130
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107023679
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107023679
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107023679
03036 Chromosome and associated proteins [BR:
spen03036
]
107023679
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107023679
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107023679
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107023679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
HEAT_EZ
Htt_N-HEAT_1
SCD
Adaptin_N
CLASP_N
Cnd1
TAF6_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
107023679
NCBI-ProteinID:
XP_015079935
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All DBs
Position
6:53517284..53526129
Genome browser
AA seq
581 aa
AA seq
DB search
MSAIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGMFIPYVGGVEHARVLLPPLEGLCSVEETCVREKAVESLCKIGSQMKES
DLVESFIPLMKRLAAGEWFTARVSSCGLFHIAYPSAPEPLKNELRTIYSQLCQDDMPMVR
RAAATNLGKFAATIEQPHLKTDIMSMFETLTQDDQDSVRLLAVEDCAALGKLLEPKDCVA
QILSVIVNFAQDKSWRVRYMVANQLYDLCEAVGPEATRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPKWAMEHIIPQV
LDMINDPHYLYRMTILHAISLLAPVLGSEITCSKLLPVIIAASKDRVPNIKFNVAKVLQS
VIPIVEQSVVESTIGPCLVELSEDPDVDVRFFASQALQATK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctattgatgagccgttatatcctattgcggttttgattgatgagttgaagaat
gaagacatccagcttagattgaattcaatccggcgattatctaccatcgcccgtgctctt
ggtgaggagagaacacggaaagagttgattccatttctaagtgagaacaacgatgatgat
gacgaagttcttcttgcaatggctgaagagttgggcatgtttattccatatgttggaggg
gttgaacatgcgcgtgtattgcttccacccttagaaggactttgtagtgttgaggagact
tgtgttagggaaaaggcagttgagtcattatgcaaaattgggtcccaaatgaaggaatcg
gatttggtggaatcatttattccacttatgaagagactggctgctggagagtggttcact
gctcgagtttcctcctgtggattgtttcacattgcttatcctagtgctccagagccacta
aagaatgaactgagaaccatatatagccaactttgtcaagatgatatgcctatggtgagg
agagcagctgccacaaatcttggaaagtttgctgcaactattgaacaaccccatctgaag
accgacatcatgtcaatgtttgagaccctgacacaggatgatcaagattctgtccgttta
ttggctgttgaggattgtgctgctttggggaagctgctggagcctaaagactgtgtagca
caaattctttccgtcatagttaattttgcgcaggataagtcttggcgtgttcgttacatg
gttgcaaatcaactctatgatctttgtgaggcagttggaccagaggctaccaggacggat
ttggtccctgcctatgttcggctacttcgtgataatgaggctgaagtgcgtatagctgct
gctggcaaggtgactaagttttgccgtattttgagccctgaacttgctatccagcatatc
cttccttgtgtaaaggaactatcatcagattcatcccagcatgttcgttctgctttggct
tcagttatcatgggaatggcacctattttaggaaaggatgcaactattgagcagcttctc
ccgattttcctctctcttctgaaggatgagtttcctgatgttcgtttgaatattatcagt
aagcttgatcaagtaaaccaggtaattggaattgatttgctctcccaatcactgctgcca
gcaattgttgaacttgcagaagatagacactggagggttcggcttgcaataattgagtac
atacctctattggcaagtcagctgggtgttggcttttttgatgacaagcttggtgctctg
tgcatgcaatggctaaaagataaggtttactctattagagatgcagctgcaaacaatgta
aagcgccttgctgaggaatttggtccaaaatgggcaatggagcatataattccacaggtg
ttggatatgattaatgacccacattatctttaccggatgaccatccttcatgcaatttct
cttcttgcccctgtcttgggctcagaaattacttgctccaaactcctgccggttataatt
gctgcatcaaaagacagggtaccgaatatcaagttcaatgtggctaaggtgttgcagtct
gttattccaatagttgaacaatctgttgtggagagcacaattggaccgtgtttggttgaa
ctcagtgaggacccagatgttgatgttaggttttttgccagccaagccctacaagcaacc
aagtga
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