Solanum pennellii: 107025748
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Entry
107025748 CDS
T04130
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spen
Solanum pennellii
Pathway
spen03030
DNA replication
spen03410
Base excision repair
spen03420
Nucleotide excision repair
spen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107025748
03410 Base excision repair
107025748
03420 Nucleotide excision repair
107025748
03440 Homologous recombination
107025748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107025748
03400 DNA repair and recombination proteins [BR:
spen03400
]
107025748
Enzymes [BR:
spen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107025748
DNA replication proteins [BR:
spen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
107025748
DNA repair and recombination proteins [BR:
spen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
107025748
NER (nucleotide excision repair)
GGR (global genome repair) factors
107025748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
107025748
NCBI-ProteinID:
XP_015081985
LinkDB
All DBs
Position
7:complement(77654114..77663995)
Genome browser
AA seq
1119 aa
AA seq
DB search
MAFLGLSVQSSPFKPTSYVWFSPHSFSSRTFWASSGKALHRGEDCKTRSIENASSSLAVL
GDPIKQISSHERKLFSSGLQQKIEEDSIYGWNAEIDAIKALKAKNAYNSYKKISAANCSV
SASTDRKVKDENSDVPIEVNTRMMRERVTSSYSATTCISGGSLSSKSKPPHNPNRGEKKD
VGNWREYKKHLPQLSVGINHSRNNEVTSINKVDGPNVSHYKPLSKGSNLNEQLSSKIVNA
KFEKANKLWQGSASNQIRDSVNGTDTKVVTVKAKSVILEQATIKREKNAVKSVATDFVNG
TETKIVSDKGTGLDQITLRERLGAMYEKVHIVDNLSAAKEVVSKLTSQYKHLVHACDTEV
ANIDVKQQTPVDHGEVICFSIYSGPEADFGDGKSCIWVDVLDGGGKDLLVEFAPFFQDPS
IRKVWHNYSFDNHVMENYGFEVSGFHADTMHMARLWDSSRRILGGYSLEALTGDSHVMCD
ARLVHAERLFHDEGLFGKISMKTIFGRKKLKKDGTEGKVIMIPSVEELQRTERELWICYS
ALDSISTLMLYESLKKKLSKRIWTFDGVRKGSMYEFYEKYWRPFGEVLVQMETEGVLVDR
AYLAEIEKVAKAEQLVAVNRFRNWAAKYCADAKYMNVGSDTQLRQLFFGGIQNRKNVDES
LPNEKEFKVPNVDKVIEEGKKAPTKFRKIHLHRICDPINTEIFTASGWPSVSGDALKALA
GKVSADFDIFDEVDGNAEEVPETSVDEALTTNNEALSQNPEISAYGTAYHAFGGGQKGIE
ACHAIAALCEVCSIDSLISNFILPLQGHDVSGENGRIHCSLNINTETGRLSARRPNLQNQ
PALEKDRYKIRQAFVAAEGNSLIVADYGQLELRILAHLANCKSMLGAFEAGGDFHSRTAM
NMYSHIREAVEKGQVLLEWHPQPGEDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTTIGL
SRDWKVSVKEAKETVERWYSDRKEVSDWQEQRRFEAREFGCVHTLLGRARWFPSVKNATG
SVKGHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGPEESE
KEAMAIVVHCMSNPFNGKNILRVGLSVDAKCAKNWYSAK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttgggtctttctgttcaatcttctccttttaaaccaacttcttatgtttgg
ttttctcctcattctttctcttctcgtactttttgggcttcttctggtaaagcccttcac
aggggggaagattgcaaaactcggagtatagaaaatgcatcttccagcttagcggtgctt
ggcgatcccattaaacaaatatcaagtcatgaaaggaagttattctctagtggattacaa
cagaagattgaggaagacagtatttacggatggaatgctgaaattgatgctattaaagct
cttaaagcaaaaaacgcttataatagttataaaaagatttcagcggcaaattgcagtgtt
agcgcctccacagatcggaaggtgaaagatgaaaattctgatgttccaattgaagtcaat
acgagaatgatgcgtgagcgtgtcacctctagctattcagctacaacctgtatttcagga
ggcagcttatcttcaaaaagcaaaccacctcataaccctaatagaggagagaagaaagac
gttgggaactggagagagtataaaaaacatttgcctcaactatctgtaggtatcaaccat
tcaagaaacaatgaagtcacatcaataaataaggttgatggtcctaatgtatctcattac
aaaccattatcaaaaggttccaatcttaatgagcaattatcaagcaaaattgtaaacgcc
aaatttgaaaaagcaaataaactttggcagggtagtgcatctaatcaaataagagacagt
gtgaatgggactgataccaaggtggttactgtcaaagcaaaaagtgttatcctggagcaa
gccactatcaaaagggaaaagaatgcagttaaatcggtggcaactgattttgtgaatgga
actgagactaagattgtcagtgataaaggaacaggtttagatcagattaccctccgtgag
aggctgggtgcaatgtatgaaaaagtgcatatagttgacaatttatctgcagccaaggaa
gttgtcagcaaacttacaagtcagtacaagcatctcgtccatgcatgtgatactgaggta
gcgaatattgatgtcaagcagcaaacacctgttgatcatggagaagttatatgcttcagt
atttattctggaccagaggctgattttggtgatgggaaatcttgtatctgggtagatgtt
cttgatggaggtggcaaggacctattagtcgaatttgctccgtttttccaagacccatcc
atcagaaaggtctggcacaattatagcttcgacaaccacgtaatggaaaattatgggttt
gaagtatctggttttcatgctgacacgatgcacatggcacgactttgggattcctctagg
cgaattttgggtggttattcattagaggcactaacaggtgattctcatgtcatgtgtgat
gctagactagtccatgctgaaaggctgttccatgatgaaggtctgtttggtaaaatatct
atgaaaactatctttggtcggaaaaagctgaagaaagatggaactgagggtaaagtaatc
atgattccttctgtcgaagagttgcaaaggactgaacgagaattgtggatttgttattct
gcattagactccatcagcacattgatgctttatgagagcttgaagaaaaaactatctaaa
cggatctggacattcgatggagttcgtaaaggatccatgtatgaattttatgagaaatac
tggcgtccatttggtgaggttctagttcaaatggaaactgagggtgtgctggttgaccgt
gcctatcttgctgagattgagaaagtcgctaaagctgagcagctggttgctgtgaataga
tttcgtaactgggcagctaagtactgtgctgatgcaaagtacatgaatgttggaagtgac
acacagttgcgtcagctgttttttggtggcatccagaatagaaagaatgttgatgagagt
ctaccaaatgagaaagaattcaaagttccgaatgttgataaagtaattgaagaaggaaag
aaggctcccaccaaatttcgtaaaatccatctacataggatttgtgatcctatcaacact
gagattttcactgccagtggttggccttccgttagtggagatgctttgaaggctctcgct
ggcaaagtttctgcagactttgatatttttgatgaagtggatggcaatgctgaggaagtt
cctgaaacaagcgttgatgaagctttaactacaaataacgaagctctcagtcaaaatcca
gaaatttcagcttatggaacagcctaccacgcctttggaggtgggcagaaaggaattgag
gcatgccatgccattgcagccttatgtgaagtttgctccatagactctttaatatccaac
tttatcctccccttgcagggtcatgatgtgtcaggtgagaatggacggattcattgctcc
ctgaatataaatactgaaactgggcgcttgtctgcaaggagaccaaatttacagaatcag
cctgctcttgagaaagataggtataaaattcggcaagcttttgtagctgcagaggggaat
tccttgattgtggctgactatgggcagttggaactaaggattcttgcacatcttgccaac
tgtaagagcatgttgggtgcattcgaagctggtggagacttccattcaaggactgctatg
aatatgtattctcacatccgtgaagctgttgaaaaggggcaggtacttcttgagtggcat
cctcaaccaggtgaagacaaaccaccagtccctctgctaaaggatgcttttggctctgaa
agaaggaaagcaaagatgctcaatttttcaattgcgtacggaaaaactacaattggactc
tctcgcgattggaaggtatctgtaaaggaagcaaaggaaacagttgaacgttggtatagt
gatagaaaagaagtgtcagattggcaagaacaacgcagatttgaagcacgtgagtttgga
tgtgttcacacacttctaggacgagcacgttggtttccgtcagtaaaaaatgcaaccgga
tccgtaaaaggtcacatagaacgagctgctatcaatactccagtgcagggaagtgctgca
gatgtcgctatgtgcgcgatgttagagatatcaaagaatgcacgactaaaggagcttgga
tggaaattgcttttacaggttcatgatgaagttattttggaaggaccagaagaatctgag
aaagaagccatggcaatagtggttcactgcatgtccaatccgtttaatgggaaaaatatt
ctcagagttggcttatctgtcgatgctaaatgtgctaaaaactggtattctgccaagtag
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integrated database retrieval system
