Sphingobium sp. EP60837: EP837_00146
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Entry
EP837_00146 CDS
T04432
Symbol
odc1
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00330
Arginine and proline metabolism
sphb00480
Glutathione metabolism
sphb01100
Metabolic pathways
sphb01110
Biosynthesis of secondary metabolites
sphb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
EP837_00146 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
EP837_00146 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EP837_00146 (odc1)
Enzymes [BR:
sphb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
EP837_00146 (odc1)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NitrOD5
Motif
Other DBs
NCBI-ProteinID:
ANI76601
UniProt:
A0A173KRM3
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Position
1:complement(159141..160331)
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AA seq
396 aa
AA seq
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MHKHHSALGVATALTPAAPVTLIRPQAAARAARFFTEKFPGRSLYAVKANPSPDLLRTLW
DSGITHYDVASIAEVRLVAQTLPQAKLCFMHPVKAEEAIAEAYNVHGVRTFSLDTIDELE
KILRATDDASDLELCVRLRVSSEHSELSLASKFGAELGETRELLMATRQAADALGICFHV
GSQAMSPQAYSDAIERVRAAIVDAAVTVDIIDVGGGFPSVYPGMEPPALEAYFDAIHRGF
ESLPVSYSSELWCEPGRALSAEYSSIIVRVERRRGTELYINDGAYGALFDAAHIGWRFPV
ALLREEESEAELTGFSFYGPTCDDMDHMVGPFMLPDDVAAGDYIEIGMLGAYGAAMRTGF
NGFTSEAIIEVEDEPMASLYAEPVPARRRATVIKLG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaagcaccatagcgcgctgggggtagcgaccgccctcacaccggcagcaccggta
acgctgattcgtccccaggctgcagcccgggccgcccgattcttcactgagaagtttccg
gggcgttccctctatgcggtcaaggcgaatccctcgccggacttgctccggactttgtgg
gacagcggaatcacgcattatgacgttgcgtcgatcgcggaggttcgcctcgtcgcgcag
acgctgccccaagccaagctgtgcttcatgcacccggtcaaggctgaggaagccattgcg
gaggcttacaacgtccatggcgtgcgcaccttctcgctcgacacgatcgacgagctggaa
aagatcctgcgcgccaccgatgacgccagcgacctcgaactgtgcgtgcgcctgcgcgtc
tcgtccgaacattcggaactgagcctggcgtccaaattcggcgccgaactgggcgagacc
cgcgaattgctgatggccacgcgtcaggcggccgatgccctcggcatatgcttccatgtc
ggtagccaggcgatgagtccgcaggcttatagcgacgccatcgaacgcgtccgcgccgcg
atcgtcgatgcggccgtaacggtcgatatcatcgacgtcggcggcggtttcccgtcagtc
tatcccggcatggaacccccggcgctggaagcctatttcgacgctatccatcgcggcttc
gagagcctgccggtcagctattcgtcggaactatggtgcgagcctggccgcgcgctatcg
gcagaatatagctccatcatcgtgcgagtagagcgccgccgcggcaccgagctctacatc
aatgatggcgcttatggcgcgctgttcgacgctgcacatatcggctggcgtttccccgtg
gcgctcctacgtgaagaagagagcgaggcggaactgaccggcttttccttctacggcccg
acctgcgacgacatggaccatatggtcggccccttcatgctgccggacgatgtggctgcg
ggcgactatatcgaaattggaatgctcggggcctatggcgcggcgatgcgtacgggtttc
aacggtttcacatcggaagcgatcattgaggtagaggatgagcctatggccagcctctat
gccgaacccgtccctgcgcgccgtcgcgcaactgtcatcaagctgggctaa
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