Rhizorhabdus wittichii DC-6: HY78_00250
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Entry
HY78_00250 CDS
T05200
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_00250
01504 Antimicrobial resistance genes [BR:
sphd01504
]
HY78_00250
Transporters [BR:
sphd02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
HY78_00250
Antimicrobial resistance genes [BR:
sphd01504
]
Gene variants
Tetracycline resistance genes
Transporters
HY78_00250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Sugar_tr
MFS_4
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ARR51997
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All DBs
Position
49767..51026
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AA seq
419 aa
AA seq
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MSVSERGKSNATVFIVATILIDAIGFGIVIPVLPRLVMEVGQLDLPAAIRVGGWLSVVYA
LMQFLCGPLAGNLGDRFGRRPVLLLSLAGLAVDYVLMGFAHTLALLFLGRLIAGVFGASF
SPATAALADITAPEDRAKRFGLVGAAFGIGFILGPALGGVLGEFGHRMPFYAAAICSALN
FTFGFFFFPETLPPEKRRPFSFARANPVGALLQARKMRGVLGLSGILLLWNIASMVYPAT
WSFFAIAQYGWSNGMIGLSLALAGISMAVVQATVLGRVIKRFRERRTAMIGVAVAAFGYL
GYALVPYAWFGMIVIVITALQALVQPSITALMSQRAPADAQGEMQGFIGSLNAVGAIAAP
LLLNPALAWFTGPDAPVHFPGAAFVIASAFAFAALLSLAMTRRIRDDAAADQMPSATGA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtttcagagcgtggcaagagcaacgccaccgtcttcatcgtcgccaccatcctg
atcgacgcgatcggcttcggcatcgtcatcccggtgctgccgcgcctcgtcatggaggtc
ggccagctcgacctgcccgcggcgatccgcgtgggtgggtggctatcggtcgtctatgcg
ctgatgcagttcctgtgcgggccgctcgccggcaatctcggcgatcgcttcggccgccgg
ccggtgctgctgctgtcgctcgcgggcctcgccgtcgactatgtgctgatgggcttcgcc
catacgctcgctttgctgttcctcgggcggctgatcgccggcgtgttcggcgcgtcgttc
agcccggcgaccgcggcgctggccgacatcaccgcgcccgaggaccgcgccaagcgcttc
gggctggtcggcgccgccttcggcatcggcttcatcctcggcccggcgctcggcggcgtc
ctcggcgagttcgggcaccgcatgcccttctacgccgccgcgatctgctcggcgctcaac
ttcaccttcggcttcttcttctttcccgagacgctgccgccggagaagcgccggcccttc
agcttcgcccgcgccaacccggtcggcgcgctgctgcaggcgcgcaagatgcgcggcgtg
ctggggctgtcaggcatcttgctgctgtggaacatcgcctcgatggtctatccggcgacc
tggtccttcttcgcgatcgcccaatatggctggtcgaacgggatgatcggcctgtcgctg
gcgctcgccggcatctccatggcggtggtccaggccaccgttctcggccgggtgatcaag
cgcttccgcgagcggcgcaccgcgatgatcggggtcgccgtcgccgcgttcggctatctc
ggctacgccctcgtgccctatgcctggttcggcatgatcgtcatcgtgatcaccgcgctg
caggcgctggtccagccgtcgatcaccgcgctgatgtctcagcgcgcgccggccgacgcg
cagggcgagatgcagggcttcatcggcagcctcaacgcggtcggcgcgatcgcggcgccg
ctgctgctcaaccccgcgctcgcctggttcaccggcccggacgcgccggtccatttcccc
ggcgcggccttcgtcatcgcctcggccttcgccttcgccgcgctcctgtcgctggcgatg
acgcggcggatacgcgacgacgcggcggcggatcagatgccgtcggcgaccggggcgtag
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