Rhizorhabdus wittichii DC-6: HY78_06435
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Entry
HY78_06435 CDS
T05200
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HY78_06435
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphd01007
]
HY78_06435
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphd03016
]
HY78_06435
Enzymes [BR:
sphd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HY78_06435
Amino acid related enzymes [BR:
sphd01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HY78_06435
Transfer RNA biogenesis [BR:
sphd03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HY78_06435
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
ARR53112
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Position
complement(1339931..1341526)
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AA seq
531 aa
AA seq
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MTDSITPVALREAALVSKAWPYEEARKLLKRYEKGAPAKGHVLFETGYGPSGLPHIGTFN
EVLRTTMVRRAYEEMSDVPTRLIAFSDDMDGLRKVPDNVPNQEMLRAHLGKPLTKIPDPF
GKYESFAHHNNAMLREFLDRFGFDYDFRSSTEAYESGQFDEALKDILRHYDGIMGIMLPT
LRKERQATYSPVLPISPKSGVVLQVPVEVVDADQGLIRFDDEGETVVQSILGGKAKLQWK
VDWAMRWVALGVDYEMSGKDLIDSVVQSSKIARELGARPPEGFNYEMFLDEKGEKISKSK
GNGLSLEQWLTYGPEESLAFYAYREPKKAKQLHMGVIPRAVDDYWQFRGNYPGQPIEQKL
GNPVHHIHGATGDAVPDNVLPVTFGLLLNLVGVMGDASKEQVWGYLANYVPDASAAKYPE
LDRLIGHALAYHRDFVAPTLKRRKPTDNEAAALRALDAKLAAMPADASAEDIQNEVYAIG
KEEAHGFASLRDWFKALYETLLGAEQGPRMGSFIALYGIANSRRLIAEALA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagcatcacccccgtcgccctgcgcgaagccgcgctcgtctccaaggcctgg
ccctatgaggaggcgcgcaagctgctcaagcgctatgagaagggcgcgccggccaaggga
catgtgctgttcgagaccggctacggcccgtcgggcctgccgcatatcggcaccttcaac
gaggtgctgcgcacgacgatggtgcgccgcgcctatgaggagatgtcggacgtcccgacc
cgcctgatcgcgttcagcgacgacatggacgggctgcgcaaggtgccggacaacgtgccg
aaccaggagatgctgcgcgcccatctcggcaagccgctgacgaagatccccgatccgttc
ggcaaatatgagagcttcgcgcatcacaacaacgcgatgctgcgcgaattcctcgaccgc
ttcggcttcgactatgacttccgctcctcgaccgaggcctatgagagcggccagttcgac
gaagcgctgaaggatatcctgcgccattatgacggcatcatggggatcatgctgccgacg
ctgcgcaaggagcggcaggcgacctattcgccggtgctgccgatcagcccgaagagcggc
gtcgtcctgcaggtgccggtcgaggtggtcgacgccgaccagggcctgatccgcttcgac
gatgagggcgagacggtcgtccagtcgatcctcggcggcaaggccaagctccagtggaag
gtcgactgggcgatgcgctgggtcgcgctgggcgtcgactacgagatgtcgggcaaggac
ctgatcgactcggtcgtccagtcgtcgaagatcgcgcgcgagttgggcgcccgcccgccc
gagggcttcaactatgagatgttcctcgacgagaagggcgagaagatctccaagtcgaag
ggcaacggcctcagcctcgagcaatggctgacctacgggcccgaggagagcctggccttc
tacgcctatcgcgagccgaagaaggcgaagcagctccacatgggcgtgatccccagggcg
gtcgacgactattggcagttccgcggcaattatcccggccagccgatcgagcagaagctc
ggcaatccggtccaccacatccacggtgcgaccggggacgcggtgcccgacaatgtgctg
ccggtcaccttcggcctgctgctcaacctcgtcggggtgatgggcgacgcgtcgaaggag
caggtgtggggctatctggccaattacgtgcccgacgcctcggccgcgaaatatcccgag
ctcgaccggctgatcggccatgcgctcgcctatcatcgcgacttcgtcgcgccgacgctc
aagcgccgcaagccgaccgacaatgaggcggcggcgctgcgcgcgctcgacgcgaagctg
gcggcgatgccggccgacgcctcggccgaggacatccagaacgaggtctatgcgatcggc
aaggaggaggcccatggcttcgcctcgctgcgcgactggttcaaggcgctttacgagacc
ctgctcggcgccgagcagggcccgcgcatgggcagcttcatcgcgctctacggcatcgcc
aacagtcgccgcctgatcgccgaggcgctggcctga
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