Rhizorhabdus wittichii DC-6: HY78_09555
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Entry
HY78_09555 CDS
T05200
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00906
Carotenoid biosynthesis
sphd01100
Metabolic pathways
sphd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
HY78_09555
Enzymes [BR:
sphd01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
HY78_09555
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Motif
Pfam:
Lycopene_cycl
NAD_binding_8
FAD_oxidored
DAO
FAD_binding_2
HI0933_like
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
ARR53647
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Position
1963375..1964517
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AA seq
380 aa
AA seq
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MSGVMCDLAIIGGGLSGGLIALAARRARPDRRVLLIEAAPTLGGAHLWSFLDSDVEAEDR
PLLEPLVNYGWREFAVVFPLYKRALPFPFYSIRSDRFDAALREAMPAESILTGRRALGVA
PDGVVLEDGTLIGAGGVIDARGPGDLSLLDLHYRKFVGYELTLDGPHSVRRATLIDAAAD
PAEGFQYMEMLPIENDRLFIEDVRYESWPEMDMADHGNRIVNHAARFGWRIRSSARGQAG
VLPIALGGDFADYWRSGGEGVAKAGLRAGLFHPVTGNSLADAARVARLVAEADDWSGAAL
HAMLHDHAARAWAKRAYYRRFATRMLRDTPPAEGYRMLESLYAMDADLIARFHAMRLGFA
DRMALSLGEGPMPVGAMFRR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtcatgtgcgatctcgccatcatcggcggcggcctttcgggcggactgatc
gcattggccgcgcgccgggcgcggcccgatcgccgcgtcctgctgatcgaggcggcgccg
acgctgggcggcgcgcacctctggtccttcctcgacagcgacgtggaagcggaggaccgg
ccgctgctcgaaccgctggtcaactatggctggcgcgagttcgcggtggtcttcccgctc
tacaagcgggcgctgcccttccccttctacagcatccgttccgaccggttcgacgcggcg
ctgcgcgaggcgatgccggccgaaagcatcctgaccgggcggcgcgcgctgggcgtcgcc
cccgacggggtggtgctggaggacgggacgctgatcggggcgggcggcgtgatcgacgcg
cgcgggccgggcgacctgtcgctgctagacctccattaccgcaagttcgtcggctatgag
ctgaccctcgacggcccgcacagcgtgcgccgcgcgacgctgatcgacgccgccgccgat
ccggccgagggcttccaatatatggagatgctgccgatcgagaacgaccggctgttcatc
gaggacgtccgctacgaaagctggccggagatggacatggccgaccatggcaaccgcatc
gtcaaccatgcggcgcgcttcggctggcgcatccgcagctcggcgcgcggccaggcgggc
gtcctgccgatcgcgctgggcggcgacttcgccgactattggcgatcgggcggcgagggc
gtcgccaaagcgggcctgcgcgccgggctgttccacccggtcaccggcaattcgctggcc
gatgccgcgcgggtcgcgcggctggtcgccgaagccgacgactggtcgggcgcggcgctc
cacgccatgctccacgaccatgccgcgcgcgcctgggcgaagcgggcctattatcgccgc
ttcgccacgcggatgctgcgcgatactccgccggcggaaggctacaggatgctcgaaagc
ctctatgcgatggacgccgacctgatcgcgcgcttccacgcgatgcgcctcggcttcgcc
gaccgcatggcgctcagcctcggcgaggggccgatgccggtcggggcgatgttccggcga
tga
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