Sphingobacterium sp. dk4302: GFH32_05085
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Entry
GFH32_05085 CDS
T06292
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sphe
Sphingobacterium sp. dk4302
Pathway
sphe00020
Citrate cycle (TCA cycle)
sphe00785
Lipoic acid metabolism
sphe01100
Metabolic pathways
sphe01110
Biosynthesis of secondary metabolites
sphe01120
Microbial metabolism in diverse environments
sphe01200
Carbon metabolism
sphe01210
2-Oxocarboxylic acid metabolism
Module
sphe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GFH32_05085
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GFH32_05085
Enzymes [BR:
sphe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
GFH32_05085
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QGA25733
UniProt:
A0A5Q0Q8B5
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Position
complement(1178464..1181208)
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AA seq
914 aa
AA seq
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MDKLTYLSNADSSYIDGLYQAYKADPNAVDFGWQKFFEGFEFGQGSEGVSGSVDVENVSE
HALKEIDVLNMIHGYRDRGHLFTHTNPVRERRKYYPGKELETFGLSEADMDTVFNAGVEV
GLGPAKLRDIRQLIEDTYCRSIGAEFKYIRNPEKIKWLQDRMEADRNKPNYDKETKQRIL
KKLNRAVVFENFLGTKFLGQKRFSLEGAEALIPALDSVLEKGSNLGIQEFMIGMAHRGRL
NVLANIMGKPYKTILSEFEGKMYADEDPELQFGGDVKYHLGYSSDITTDSGKQIHLSLAP
NPSHLETVDPIVEGVVRSKIDMKYDGDASKIAPILIHGDAAIAGQGVVYEVTQMSKLEGY
RTGGTIHIVINNQVGFTTNYKDARSGTYCTDVAKITSSPVFHVNGDDAEAVVYAINLAVE
YRQKYKTDVFIDLLCYRRYGHNEADEPKFTQPLLYKAIEKHANPKEVYAKKLQDEGTIDA
AYAKEVEKEFKDYLQLQLDASKQAESLEGEIPMFGGAWKGLRPAKKSDIFAEANTKVSEK
EFKTLATEITTLPKDKKFFRKISKLFEDRAAMIKNDSYDWAMGELMAYATLLNEGKRVRI
SGQDVQRGTFSHRHAVLTLEDSEEKYIPLAQVNGGDRFNIYNSLLSEYAVLGFEYGYALA
NPSSLTIWEAQFGDFYNGAQIIVDQYLSSAETKWKRSNGLVMLLPHGMEGQGPEHSSGRI
ERFLELCANDNLILANCTTPANYFHLLRRQLVRDFRKPLVVFTPKSLLRHPKVVSKLTDF
TKVNFQEVIDDSYAKAASVKRVLFCSGKIYYDLLEKQQADKRTDIAIVRIEQLYPSPIEQ
LKAIHKKYSKAKEFIWVQEENENMGAWPYFCRTLRKTDVEFTDYIARTASGSPATGYMKK
HVAQQEAIINKSFE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattgacatatttgagtaatgccgactcgagttatatcgacggattatatcaa
gcgtacaaagccgatccaaacgctgtagactttggctggcaaaagttttttgaaggattt
gaatttggacaaggttctgaaggcgtatctggttctgtagatgttgaaaatgtttcggaa
cacgctttaaaggaaatcgatgttcttaatatgattcacggctatagagatcgtggtcac
cttttcactcatacaaaccctgttcgcgagcgtcgcaaatactacccaggcaaagaatta
gaaactttcggattatctgaagctgacatggacactgtatttaatgcaggtgttgaagtt
ggattaggtcctgcgaaattacgtgatattcgtcagttgatcgaagacacctactgtcgt
tcgattggtgcggaatttaaatatatccgtaacccagagaagattaaatggcttcaagat
cgtatggaggcagatcgtaacaagccgaactacgataaagaaacaaaacaacgtattcta
aagaaactaaatagagcagtcgtttttgaaaacttccttggaacaaaattcttaggtcaa
aaacgtttttctcttgaaggtgcagaagcattgattcctgcattagactctgtattggaa
aaaggtagcaacctaggtatccaagagtttatgattggtatggcacaccgtggtcgtttg
aatgtattagcaaacatcatgggtaagccttataaaactatcctttcggagtttgaaggt
aagatgtatgctgatgaggatcctgaattacaattcggtggagacgtaaaataccactta
ggatattcttctgacatcacaacagattctggcaaacaaatacacttatcattagcacct
aacccttcccacttggagacagttgatccaattgtagaaggtgttgttcgttctaagata
gacatgaaatatgatggagatgcatctaaaattgctcctatcttaattcatggggatgct
gcaattgctggacaaggtgtcgtatatgaagtgactcagatgtctaagttagaaggttac
cgtactggtggtacaattcatattgttatcaacaaccaagtaggttttacgacaaactat
aaagatgcgcgttctggtacttactgtactgacgttgcaaaaatcacttcttctccagta
ttccacgttaatggtgatgacgcagaggcagttgtttatgcgattaacttagctgtagaa
tatcgtcagaaatataagactgatgttttcatcgacttgttatgttacagacgttatgga
cataacgaggcagatgagcctaaattcactcagcctttattgtataaagcaatcgagaag
catgctaatccgaaagaggtttatgctaagaaacttcaagatgaaggtactatcgacgcg
gcctatgcgaaagaagttgagaaagaattcaaagactatttacaattgcaattagatgct
tctaaacaagcagaaagcttagaaggtgaaatccctatgttcggtggagcatggaaaggt
cttcgccccgctaagaaatctgatatctttgctgaagcaaacacaaaggtttctgagaaa
gagtttaaaacacttgctacagagattactactttgccgaaagacaaaaagttcttccgt
aagatttccaaattatttgaagatcgtgcagcgatgatcaaaaatgattcttacgactgg
gcaatgggagaattaatggcttacgcgactttattaaatgaaggtaaacgcgttcgtatc
tcaggacaagatgttcaacgtggaacattctctcaccgtcatgcggtattaacattagaa
gattctgaagagaaatacattccattagcgcaagttaatggtggtgatcgcttcaacatc
tataactcattgttatctgaatatgccgttctaggttttgaatatggatatgcactagcg
aatccgagttcattaacaatatgggaggctcaatttggtgacttctacaatggtgctcaa
atcatcgttgaccagtacctaagtagcgcggaaacaaaatggaagcgttccaatggttta
gtgatgttgttaccacacggtatggaaggtcaaggccctgaacactcttcaggtcgtatt
gagcgtttcttagagctatgtgctaatgacaacttaattcttgctaactgtacaacacct
gcaaactacttccacttattacgtcgtcaattagtacgtgacttccgtaaaccattggtt
gtatttacgccaaaaagcttattgcgtcatccaaaagttgtttctaaattaacagacttt
acaaaagttaatttccaagaagtaattgatgatagctacgcaaaagcagcttcggttaaa
cgtgtattattttgttcaggaaaaatctactacgatttgttagagaaacaacaagctgat
aaacgtacggatatagcaattgttagaattgagcaactataccctagcccaatcgagcaa
ttaaaagcgattcacaaaaaatacagtaaagcgaaagaatttatctgggtacaagaggaa
aatgagaacatgggtgcatggccttatttctgtcgtacattacgtaaaactgacgttgaa
tttactgactatatcgcacgtacggcaagtggtagccctgcaacaggatacatgaaaaaa
cacgttgctcaacaagaagcaatcataaataaatcattcgaataa
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