Sphingorhabdus sp. M41: AZE99_05100
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Entry
AZE99_05100 CDS
T04317
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg00190
Oxidative phosphorylation
sphg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AZE99_05100
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZE99_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphg03019
]
AZE99_05100
Enzymes [BR:
sphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AZE99_05100
Messenger RNA biogenesis [BR:
sphg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AZE99_05100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AMO73235
UniProt:
A0A127MJA8
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All DBs
Position
1053065..1055218
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AA seq
717 aa
AA seq
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MSTADDANGAFSEDGSKRYFNREISWLGFNERVIEEAENTAHPLLERLRFLSISGSNLDE
FFMVRFAGLVGQYRQNIEERSADGLTATQQLEAIAIRADALLEHQQRVWSSLSKTLAAED
IYVSTVSELSDDGKAWFRQHFLDQIFPVLTPQALDPAHPFPFIPNKGLSLVFDLVRLSDN
QGIRELVMIPSGLPRFIRLPGESAIYVSVETVIQQFSDILFPGYAVKSSGLFRIIRDSDI
EVEEEAEDLVRYFRSAIKRRRRGDVIRLEMGPKLAEPVVAMLRENLLHDGATESRVNGLV
GVSDLDILVDEDRPDLKFTPYSPRFPERIREHGGDCFAAIRDKDILVHHPYESFEVVIEF
LRQAAADPDVVAIKQTLYRAGKQSAVIRALIDAAEAGKSVTAIVELKARFDEEQNLLWAS
ALERAGVQVVYGFIEWKTHAKISMVVRKEQEGYRTYCHFGTGNYHPITAKIYTDLSFFTA
DPRAARDAAQLFNYITGYVEPKELELISMSPRDMRKDLMGLIDQEIVNVRAGKAGMVWAK
MNSLVDPALIEKLYQASNAGVEIDLVVRGICCLRPDVPGMSDHIRVKSVVGRFLEHSRIW
AFGNGQELPNDGAKLYISSADWMPRNLDRRVEYMMPITNKTVHDQILDQVMVANLIDDEQ
SWELNADGSYTRVKPSDKPFNLHRYFMTNPSLSGRGKALKKSNAVPRLSLRRRKKKA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atatcgacagcggacgatgccaatggtgctttttcggaagatggaagcaagcgctatttc
aatcgcgaaataagctggctcgggtttaatgagcgggtcatcgaagaggctgaaaatacc
gcacatccgttgcttgagcggttgcgcttcctgtccatttccggaagcaatctcgacgaa
tttttcatggtccgctttgccgggctcgtggggcaatatcgacagaatatcgaggaacgt
tcagccgacggtctgaccgccacgcagcaactggaagcaattgcaatccgggccgacgcg
ttgctggaacatcagcagcgggtctggtcatctctgtccaagacgcttgccgcagaagat
atatatgtttcgacggtgagcgagctttccgatgatgggaaggcctggttccgacagcat
tttctcgatcagatattcccggtgctgacgccgcaggctctcgatccggctcatcctttt
cctttcattcccaacaagggactcagccttgttttcgatctggtcagattgtcggataat
cagggtattcgcgaattggtgatgataccgtcgggtctgccgcgtttcattcgcttgcct
ggcgagtccgcgatctatgtgtctgtcgaaaccgtcattcagcaattttccgatattctc
ttccctggctacgccgtgaaaagcagcggcctgttccggatcattcgcgacagtgatatc
gaagtggaagaagaggcggaggatctcgttcgctatttccgcagtgctatcaaacgtcgc
cgacgcggggatgtgatccggttggaaatggggccgaaactggcggagcccgttgttgca
atgctgcgtgagaatctgctgcatgacggcgcaacggaaagccgggtcaacggtctggta
ggagttagtgatcttgacatcctagtcgacgaagaccgccctgatctgaaattcacgccg
tatagtccgcgttttccggagcgtattagagagcatggcggcgattgtttcgccgctatt
cgtgataaggatatcctcgtccatcacccctatgaatcattcgaagtggtgatcgaattt
ttgcggcaggcggctgccgatcccgatgtcgtcgcgattaaacagaccctatatcgcgcc
ggcaagcaatccgccgtcattcgggcacttatcgatgccgcagaagccggcaaatctgtg
actgcaatcgtcgagctcaaggcgcgctttgatgaagagcagaatctgctctgggctagc
gcactggaacgagctggagtgcaggtcgtatacggatttatcgaatggaaaacccacgcg
aaaatctcgatggtcgtgcgcaaggagcaggaaggctatcgcacctattgccatttcggc
accggcaattatcatccgattaccgctaaaatctataccgatctgagcttcttcactgct
gacccgagggcggcgcgcgatgcggcgcaactattcaactatatcactggctatgtcgaa
cccaaggaactggaacttatttccatgtctccgcgcgatatgcgcaaggacctaatgggg
ctaatcgatcaggaaattgtcaatgtccgtgcgggcaaggccggtatggtctgggcgaag
atgaattcacttgtcgacccggccctgatcgagaaactatatcaagcgagcaatgccggt
gttgaaattgatctggtggtccggggcatttgctgtctgcggccagatgtgccgggcatg
tcggatcatatccgggtcaagtctgtggtcggccgttttctggagcacagccgtatctgg
gcgttcggcaatggccaggaactaccaaatgacggggctaaactctatatttcatctgct
gactggatgccgcgcaatcttgaccgccgcgttgaatatatgatgcctattaccaacaag
accgtacatgatcagatattggatcaggtcatggtggccaatttgatcgatgacgagcag
agctgggaattaaatgctgatggcagttatacaagggtgaaaccttctgacaaaccgttc
aatctgcatcgctatttcatgaccaatccgtcactgtccggccgcggcaaggcgctcaag
aaaagcaatgcggttccccgtctcagcttgcgccgccgcaagaaaaaggcgtga
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