Spiroplasma phoeniceum: SDAV_00883
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Entry
SDAV_00883 CDS
T06376
Name
(GenBank) DNA directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sphh
Spiroplasma phoeniceum
Pathway
sphh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sphh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SDAV_00883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphh03021
]
SDAV_00883
03400 DNA repair and recombination proteins [BR:
sphh03400
]
SDAV_00883
Transcription machinery [BR:
sphh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SDAV_00883
DNA repair and recombination proteins [BR:
sphh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SDAV_00883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AXF95866
UniProt:
A0A345DNS8
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All DBs
Position
complement(674877..675422)
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AA seq
181 aa
AA seq
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MNYNVELLELVYSYLKKKKNSDTFENIWNDIASKSDVTVQGASKEDVIAELYTDLVLDNR
FVLTSEGMWGLREFLKYDEIKKQYDYTDQFETTEEFEDIDLDEEDEEENDEEESLIDTLD
FDDTLDDDDNEEDDFVEIEVDDDLIENDYSIDDDDETVAAKLGITEEIDWKSLEKEMEEN
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaactataatgtagagttattagaattagtgtattcatatttaaaaaagaaaaaaaat
agcgatacttttgaaaatatttgaaatgatatagcatcaaaaagtgatgtaacagttcaa
ggagccagcaaagaagatgtcattgcagaattatatactgatttggtgttagataatcgt
tttgtgttgacaagtgaaggtatgtgagggttacgtgaattcttaaaatatgatgaaatt
aaaaaacaatatgattatactgaccagtttgaaacaacagaagaatttgaagatattgat
ttagatgaagaagatgaagaggaaaatgatgaagaagaatcattaattgatactcttgat
tttgatgatacattagatgatgatgataacgaggaagatgattttgttgaaatagaagtt
gatgatgatttaattgaaaatgattattctattgatgatgatgatgaaacagtagcagct
aaattgggtattacagaagaaattgactgaaaatctcttgaaaaagaaatggaagaaaat
aattaa
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