Sphingopyxis fribergensis: SKP52_02250
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Entry
SKP52_02250 CDS
T03542
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00906
Carotenoid biosynthesis
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SKP52_02250
Enzymes [BR:
sphk01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
SKP52_02250
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GFIT
Motif
Pfam:
Lycopene_cycl
DAO
FAD_binding_2
NAD_binding_9
FAD_oxidored
Pyr_redox_2
NAD_binding_8
Trp_halogenase
Thi4
Motif
Other DBs
NCBI-ProteinID:
AJA07386
UniProt:
A0A0A7PBA3
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Position
502245..503402
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AA seq
385 aa
AA seq
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MVGPNIDKCDIAIVGGGLAGGLAALALAAKRPDLDVRLVEPGPIGGNHVWSFFDSDIAKR
DRWLVAPLVRHHWPRYDVRFPSHDRTLRMGYKSITGEALAEAVAAALPAGHVIVDRAKHV
APDHLLLARGGRLSAKHVIDARGAGKFPALTNGWQKFVGQALRVKGGHGVEQPVVMDATV
EQVDGYRFVYLLPFDAETLFVEDTYYSDDATLDAAAVRERIAAYAAAQGWEADATTREES
GVLPVVIAGDFDRLWLASDHTARIGARAGMAHAMTGYSLPAAVRTASALPGLVDRADLPA
ILRGRAAASWRRQRFYRMLGAMLFRASEPETRYRIFERFYRLSPGLIARFYAGRSTAADK
LRLLTGKPPVPIGRAIAALSKLDWK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtggggccgaacatcgataaatgcgatatcgcaatcgtcggcggcgggctcgccggc
ggcctcgctgcgctagcgctcgcggcgaagcggcccgatctcgacgtgcggctggtcgag
ccggggccgatcggcggtaaccatgtctggtcgtttttcgacagcgacatcgcgaagagg
gaccgctggcttgttgcgccgctcgtccgccatcattggccgcgctacgacgtccgcttc
ccctcgcacgaccggacgctgcgcatggggtacaagagcatcaccggcgaagcgcttgcc
gaagcggtcgcggcggcgctgccagcggggcacgtcatcgtcgaccgcgcgaagcatgtc
gcgcccgaccatctgctcctcgcgcgcggcgggcggctgtcggcgaagcatgtcatcgac
gcgcgcggcgctggaaaattcccggcgctgaccaacggctggcaaaaattcgtcgggcag
gcgctgagggtcaagggaggccacggcgtcgaacagcctgtcgtgatggatgcgacggtc
gagcaggtggacggctatcgtttcgtctatctgctgccgttcgatgccgagacattgttc
gtcgaggacacctattatagcgacgatgccaccctcgacgcggccgccgtgcgcgagcgc
atcgccgcctatgccgcggcacaggggtgggaggccgacgcgaccacgcgcgaggaaagc
ggtgtgctgccggtggtcatcgcgggcgatttcgaccggctttggctcgcctccgatcac
accgcgcggatcggcgcgcgcgcgggaatggcgcacgcgatgaccggctattcgctcccc
gccgccgttcgcaccgcgtcggcgctgcccggccttgtcgatcgcgccgaccttcccgcc
atccttcgcggccgcgcggcggcgtcgtggcggcgccagcgtttctatcgcatgctcggc
gcgatgctgttccgcgcttcggagcctgagacccgctatcgcatctttgaacgcttctat
cgcttgtcgccgggcctgatcgcgcgcttctatgccggtcggtcgacggcggcggacaag
ttgcgcctccttaccggcaagccgcccgtgcccatcggccgggcgatcgcagcgctatcg
aaactggactggaaatga
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