Sphingopyxis fribergensis: SKP52_16960
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Entry
SKP52_16960 CDS
T03542
Name
(GenBank) site-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00270
Cysteine and methionine metabolism
sphk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SKP52_16960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphk03000
]
SKP52_16960
03032 DNA replication proteins [BR:
sphk03032
]
SKP52_16960
03036 Chromosome and associated proteins [BR:
sphk03036
]
SKP52_16960
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sphk02048
]
SKP52_16960
Enzymes [BR:
sphk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SKP52_16960
Transcription factors [BR:
sphk03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SKP52_16960
DNA replication proteins [BR:
sphk03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SKP52_16960
Chromosome and associated proteins [BR:
sphk03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SKP52_16960
Prokaryotic defense system [BR:
sphk02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SKP52_16960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AJA10264
UniProt:
A0A0A7PJX1
LinkDB
All DBs
Position
complement(3604347..3605945)
Genome browser
AA seq
532 aa
AA seq
DB search
MTAGFAIVDLFAGPGGLAEGFSSFETEGGIRPFNVALSIEKEKSAHQTLRFRSFLRQFGK
HIPQNYYDWLNFGGAEPDWKALYPLQWEAAEEEALCLTLGEQPANRIIADRVSAIRKAHG
RNTVLIGGPPCQAYSLVGRARNRGIADYDAAQDNRHFLYREYIGIISQLEPAAFVMENVK
GMLSSTVDGVRMFDLITDDLRTPTDTQGYELYAFAPKGSSGPAKGTKPSDYVVRAEALGV
PQARHRVIIIGLRRDVAAALERQSKPWRRPSHPRACAADVLDGMPRLRSGLSRQKDDGAS
WAKALANACDAVGAQNPRLEGDQEQAFRKCLSDVRASLETAAKLPRQAGKPAGIGSTCPL
ALAQWLRDDRLTALADNETRGHMPSDLARYLFAAAYAFATGQSPKASSFPAGLAPAHRNW
DSGKFADRFRVQLRDQPSTTVTSHISKDGHYFIHPDPAQCRSLTVREAARLQTFPDNYVF
RGNRTEQFVQVGNAVPPFLARQIAEALWEILSAPQLNAEQFASNPLLETVIA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgactgccggattcgccattgtcgatcttttcgccgggccgggaggactggcagaagga
ttttcatcattcgaaacggaaggtggaatccgcccgttcaacgtggctctttcaatagag
aaggagaaatcagcgcatcagactttgcggttcagaagctttctgcgtcagttcgggaaa
catatcccgcagaattactatgactggttgaattttggcggcgctgaacctgactggaaa
gcactttacccactccaatgggaggcagcagaagaagaggccctttgcctcacgttgggg
gagcaacccgcgaaccgtatcatcgcagaccgcgtttcggcgatcagaaaggcgcatggg
cgcaatacagtgcttatcggcggcccgccctgccaagcctattcgctcgtcggacgggcg
cgcaaccggggaattgccgattatgacgccgcgcaggacaaccgccatttcctctatcgc
gaatatattggtatcatcagccagcttgaaccggcggccttcgtcatggagaatgtgaag
ggcatgctgtcctccacagtggatggcgtgcggatgttcgatctcatcacggacgatctt
cgcacgcctaccgacacgcaagggtatgagctttatgcctttgcgccaaaaggcagcagc
ggcccggccaaaggcacaaaaccgtctgactacgtcgttcgcgccgaagcgctcggcgtt
ccgcaggcgcgccaccgggtcatcatcatcggcttgcgccgcgatgtggccgcagcgctg
gaacgtcagagcaaaccgtggcgtaggccttcccacccccgcgcctgcgccgccgatgtg
ctcgatgggatgccgcgcctgcgtagcgggctcagccgacagaaggatgatggcgcatca
tgggcaaaagcgctggccaatgcctgcgatgctgtaggcgcgcagaatccgcggctggaa
ggagaccaggagcaagcgttcaggaaatgcctttccgatgtccgcgcttcgctggaaacg
gcggcgaagctaccgagacaggccggaaaaccggcaggcatcggcagcacctgcccccta
gccttggcacagtggctgcgggatgacaggctcaccgctttggccgataatgaaacccgg
gggcacatgccgagtgatcttgcccgctatctgtttgccgctgcctatgcctttgccacc
gggcaatcgcccaaggcatcgtcattcccggcggggctggcaccggcgcaccgcaactgg
gatagcggaaaattcgccgacagattccgcgtccagctgcgcgatcagccttccaccaca
gtcaccagccatatttccaaggatggccattatttcatccaccccgatccggcgcagtgc
cgcagtttgaccgtgcgtgaagcggcgagactccagaccttcccggacaattatgttttc
cggggcaaccgcaccgagcaattcgtgcaggtggggaatgcggtgccaccgttccttgca
aggcaaatcgctgaggccttgtgggaaattctgtctgcaccacaactgaatgccgaacag
tttgccagtaacccgctgcttgaaacagtaattgcatag
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