Sphingopyxis fribergensis: SKP52_21965
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Entry
SKP52_21965 CDS
T03542
Name
(GenBank) major facilitator superfamily transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_21965
01504 Antimicrobial resistance genes [BR:
sphk01504
]
SKP52_21965
Transporters [BR:
sphk02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
SKP52_21965
Antimicrobial resistance genes [BR:
sphk01504
]
Gene variants
Tetracycline resistance genes
Transporters
SKP52_21965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Sugar_tr
MFS_4
MFS_2
LacY_symp
Motif
Other DBs
NCBI-ProteinID:
AJA11245
UniProt:
A0A0A7PMK5
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All DBs
Position
complement(4623133..4624371)
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AA seq
412 aa
AA seq
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MTAARTIPFIVATIFMDAVGFGIIMPVLPQLVMEVGRIDLPHAIEVGAWIGLVMAVATFL
ASPILGNLSDHFGRRRVLLLALGGLAIDYALLTIVQTLPWLFVARALSGIFGGSYAAAQA
AIADITKPEERARNFGFVGAAFGIGFVAGPALGGFLGEINPRAPFVAAAILAAANMLYGY
FIFPETLPPERRRAFDWRRANPLGAWKTMRALPGMDGVAGVLVLWQIASLVYPMTWSFYC
IAQLGWTPGMIGASLAAVGVMIALGQVFVVGPAVARFGERDAATLGILVAVAVYVGYAFT
TSTIGAFLLLIPVALQAPVQPSLMAMMSRRATAETQGEVQGISAMAMGLGQLFAPLLLTG
TMAYFTADGAPLHFPGAAFVVAAIFGLLAILMLRRLPRATETVDQIPPSVTA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcggcccgtaccatcccgttcatcgtcgcaacgatcttcatggacgcggtcggt
ttcggcatcatcatgccggtgctgccgcaactggtgatggaggtcggccgcatcgatctg
ccccacgcaatcgaggtcggggcgtggatcgggctggtcatggcggtcgctacctttctc
gcctcacccatcctcggcaatctgtcggaccatttcgggcggcggcgcgtgctgctgctc
gcgctcggcgggcttgccattgattatgcgctgctgacgatcgtccagactttgccctgg
ctgttcgtcgcgcgcgccttgtcgggcattttcggcggcagctatgcggcggcacaagca
gcgatcgctgacatcaccaagcccgaggaacgtgcgcgaaacttcggcttcgtcggcgca
gcgttcggcatcggatttgtcgccggccctgccctcggcggtttcctcggtgagatcaac
ccgcgcgcgccgttcgtggccgccgcgattctcgccgcggccaacatgctctacggctat
ttcattttccccgaaacattgccgcctgaacgccgccgcgcgttcgactggcgccgcgcg
aacccgctcggcgcgtggaagacgatgcgcgcgctgcccggcatggacggcgtcgcgggg
gtgctcgtgctctggcagatcgccagcctcgtctatccgatgacgtggagcttttattgc
atcgcgcagctcggctggacgccggggatgatcggcgccagccttgccgcggtgggcgtg
atgatcgcgctcggccaagtcttcgtcgtcggacccgcggttgcgcgctttggcgagcgc
gacgcggcgacgcttggcatcctcgtcgcggtggccgtctatgtcggctacgccttcacc
acctctacgatcggcgccttcctgctgctgatccccgtcgcgttgcaggcaccggtgcag
ccgtcgctgatggcgatgatgtcgcgccgcgcaaccgccgagacgcagggcgaggtgcag
ggaatctcggcgatggcgatggggctcggccagttgttcgcaccgctgctgctgaccggg
acgatggcctattttacggccgacggcgcgccgctgcattttccgggcgcggccttcgtc
gtcgcggcgatctttggcctgctcgcgatcctgatgctccgccgcctgccgcgcgcaacg
gaaacagtcgatcagataccgccgtcggtcaccgcatag
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