Sphingomonas sp. MM-1: G432_11300
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Entry
G432_11300 CDS
T02498
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sphm
Sphingomonas sp. MM-1
Pathway
sphm03030
DNA replication
sphm03410
Base excision repair
sphm03420
Nucleotide excision repair
sphm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G432_11300
03410 Base excision repair
G432_11300
03420 Nucleotide excision repair
G432_11300
03440 Homologous recombination
G432_11300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphm03032
]
G432_11300
03400 DNA repair and recombination proteins [BR:
sphm03400
]
G432_11300
Enzymes [BR:
sphm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G432_11300
DNA replication proteins [BR:
sphm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G432_11300
DNA repair and recombination proteins [BR:
sphm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G432_11300
NER (nucleotide excision repair)
GGR (global genome repair) factors
G432_11300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
HHH
HHH_2
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AGH49983
UniProt:
M4S4Y4
LinkDB
All DBs
Position
2377301..2380090
Genome browser
AA seq
929 aa
AA seq
DB search
MASNHLYLVDGSGYIFRAYHRLPPLTNRHGVPAGAVYGFTTMLWKLVNDLHKADGPTHLA
VILDASSRTFRNEMYDGYKANRPPPPEDLIPQFPLIRVATRAFSVPCIETEGLEADDIIA
CYVEAAQAAGWATTIVSSDKDLMQLVRPGVDMLDTMANKRIGREEVIEKWGVPPEQLGDV
LALMGDSVDNVPGVPGIGPKTAAQLIQQYGDVETVLASVEEIRKPKLKQSLIDHAANARM
SRELVRLKCDAPLPEPLDDLALKGLPPEPLRAFLEDQGFKSLLLKVDGGGNDYRPPAAAL
PPVTAPAAAQPAALEAAEQPAFDHAAYETVVTEEALDRWIAAAIAAGAVAVDTETDDIDC
IRAELVGISLSVDPGRACYIPIGHRGDGLLSEVPPQLPRALVLEKLRTVLEHPGVLKIGQ
NLKYDLIMFRRNGIDVAPYDDTMLLSYDLDAGLRGHGMDELSVAHFGHAPIAFKDVCGTG
KSQISFDKVQLDRATAYAAEDADVTLRLWRKLKPRLAREEATRVYELVDRPLVPVVAEME
MAGIRVDREELARLSGEFATRIAVLEGEIHALAGGPFTIGSPKQLGEVLFDRLGLKGGRK
GKSGVYSTDVNEMERLAEDGVEIATKVLDWRQLSKLKSTYTDALQAQINPASGRVHTSFS
LAVAQTGRLSSTDPNLQNIPIRTDIGRRIRDAFVADKGYVLLSADYSQIELRLAAHMADV
PQLKAAFADGQDIHALTAQELFGEVNRDTRGRAKTINFSILYGISAFGLAGRLGVDRAEA
QAMINRYFDRFPGIRDYIAETLTAVRDKGYVTTLFGRKTHLPGIRSAKQGERQAAERQAI
NAPIQGTSADIIKRAMARMGPALNAAGLEQVRMLLQVHDELVFELPPEDVEAASAVIRAV
MAGAAEPAVRLSVPLGVEIGTGQSWGAAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaccacctctatctcgtcgacggctcgggctatatcttccgcgcctatcac
cggctgccgccgctcaccaatcgccacggcgttccggccggcgccgtctacggcttcacg
acgatgctgtggaagctggtcaacgatctccacaaggcagatgggccgacccatctcgcc
gtcatcctcgatgcctcgtcccgcacgttccgcaacgagatgtatgacggctacaaggcg
aaccgcccgcccccgcccgaggatctgatcccgcaattcccgctgatccgcgtcgcgacc
cgcgctttctccgtcccctgcatcgagaccgaggggctggaggcggacgacatcatcgcc
tgctatgtcgaggccgcgcaggccgccggctgggcgacgacgatcgtctcgtcggacaag
gatctgatgcagctcgtccgccccggcgtcgacatgctcgataccatggccaacaagcgc
atcggccgcgaggaggtgatcgagaaatggggcgtgccgcccgagcagctcggcgacgtg
ctggcgctgatgggcgacagcgtcgacaacgttcccggcgtccccggcatcgggccgaag
acggccgcccagctcatccagcaatatggcgacgtcgaaaccgtgctcgcctcggtggag
gagatccgcaagcccaagctcaagcagtcgctgatcgatcacgcggccaatgcccggatg
agccgcgagctggtccgcctgaaatgcgatgctccgctgccagagccgctcgacgatctc
gcgctcaagggtttgccgccggagccgctgcgcgccttcctcgaggatcagggcttcaag
tcgctgctgctgaaggtcgatggcggcggcaatgattatcgcccgcccgccgccgcgctg
ccgccggtgacggcgccggccgccgcccagccggccgcgcttgaggcggcggagcagccc
gccttcgatcatgccgcctatgaaacggtggtgacggaagaggcgctggatcgctggatc
gccgccgcgatcgccgccggcgcggtcgcggtcgataccgagacggacgacatcgattgc
atccgtgccgagctggtcggcatcagcctctcggtcgatccgggcagggcctgctacatc
ccgatcggccatcgcggcgatgggctgctgagcgaggtgccgccccagttgccgcgcgcg
ctggtgctggagaagctccgcaccgtgctcgagcatccgggcgtgctcaagatcggccag
aatctgaaatatgatctgatcatgttccgccgcaacggcatcgatgtcgcgccctatgac
gatacgatgctgctcagctacgatctcgacgccggcctgcgcgggcatggcatggacgag
ctttcggtcgcccatttcggccacgccccgatcgcgttcaaggatgtctgcggcacgggc
aagagccagatcagcttcgacaaggtgcagctcgatcgcgccacggcctatgccgccgag
gatgcggacgtcacgctgcggctctggcggaagctgaagccccggctggcgcgggaggag
gcgacgcgcgtctatgagctggtcgatcggccgctggtgccggtcgtggccgaaatggag
atggccggcatccgcgtcgaccgcgaggagctggcccggctttccggcgaattcgccact
cgcatcgccgtgctggagggcgagatccacgcgcttgccggcggccccttcaccatcggc
agccccaagcagctgggcgaggtgctgttcgaccggctgggcctgaagggcgggcgcaag
ggcaagtccggcgtctattcgaccgacgtgaacgagatggagcggctggccgaggacggc
gtggaaatcgccaccaaggtgctcgactggcggcagctttcgaagctgaagtccacctat
accgatgcgctgcaggcgcagatcaatcccgcgtccggccgggtccataccagcttcagc
ctggcggtggcgcagacggggcggctgtcctccaccgatcccaacctccagaacatcccg
atccgcaccgatatcggccgccgcatccgcgacgccttcgtggcggacaagggctatgtg
ctgctgtcggccgattattcgcagatcgagctgcggctcgccgcgcacatggcggacgtg
ccccagctcaaggccgccttcgccgacgggcaggacatccacgcgctcaccgcgcaggaa
ctgttcggcgaggtcaaccgcgatacgcgcggccgggccaagacgatcaacttctcgatc
ctctacggcatctccgccttcggcctcgccggccggctgggcgtcgaccgggcggaggcg
caggcgatgatcaaccgctatttcgatcgcttccccggcatccgcgactatatcgccgaa
acgctcaccgccgtgcgcgacaagggctatgtgaccacgctcttcggccgcaagacgcat
ctgccgggcatccgttcggccaagcagggcgagcggcaggcggccgagcggcaggcgatc
aacgcgccgatccagggcaccagcgccgacatcatcaagcgggcgatggcgcgcatgggg
ccggcgctcaacgcggcggggctggaacaggtgcgcatgctgctgcaggtgcatgacgaa
ctggtgttcgagctgccgcccgaggatgtcgaggccgcgagcgcggtcatccgcgcggtg
atggcgggcgcggcggagccggcggtgaggctcagcgtgcccctgggcgtggagatcggc
accggccaaagctggggggcggcgcattga
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