Sphingobium sp. TKS: K426_20400
Help
Entry
K426_20400 CDS
T04965
Name
(GenBank) putative lycopene beta cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00906
Carotenoid biosynthesis
spht01100
Metabolic pathways
spht01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
K426_20400
Enzymes [BR:
spht01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
K426_20400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
NAD_binding_8
FAD_oxidored
FAD_binding_2
Thi4
NAD_binding_9
Trp_halogenase
GIDA
Motif
Other DBs
NCBI-ProteinID:
AMK25009
UniProt:
A0A126RSI2
LinkDB
All DBs
Position
1:complement(4115187..4116347)
Genome browser
AA seq
386 aa
AA seq
DB search
MATMTDCDLAIVGGGLAGSLTALAFAARHPDVSLLLLESGDTLGGNHIWSFFDSDVDAGD
RWLVEPLIAHRWPEGYEVRFPGHSRRLAMPYNSITSARLDAHVREVLGDAVLTGAQAAEL
TPTTVALSDGSIICAKAVLDARGGGDLSVLRCGWQKFVGQTLRLHAPHGLACPVIMDATV
EQLDGYRFVYLLPWDEQTLFVEDTYYSDTPDVDGPALDARIAAYAQAQGWQVEAVIHSEN
GVLPVVHGGDFDRFWPEADPVARLGVKAAMFQPMTGYSLPDAVRFALRLADEWPMEGRLL
AHVTREWAAIHWRQGRYYRLLGRMLFGAARPGQRWRIFERFYRLGPSLIGRFYAGRSTLG
DRIRILCGRPPVPIRDAMRALLNPPA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgaccgattgcgacctggcgatagtgggcggtggccttgccggcagcctg
accgcgctcgccttcgccgcgcgccatcccgatgtctccctcctgctgctggaaagcggc
gacacgctgggcggcaatcatatctggtcctttttcgacagcgatgtggatgccggggat
cgctggcttgtcgagcccctgatcgcccatcgttggcccgaaggctatgaggttcgcttc
cctggtcacagccgtcggcttgccatgccttataacagcatcacatcggcacggctcgac
gcccatgtccgcgaagttcttggcgatgccgtcctgaccggcgcacaggccgctgaactg
acgcccaccaccgtcgccttgtccgacggcagcatcatctgcgccaaggcggtgctcgac
gccaggggcgggggcgatctttccgtcctgcgctgcggctggcagaagttcgtcggccag
accctgcgcctgcatgccccgcacggccttgcctgcccggtcatcatggacgccaccgtc
gagcagttggacggctatcgcttcgtctatctgctgccctgggatgagcaaaccctcttc
gtcgaggatacctattatagcgacaccccggacgttgacgggcccgcgctcgatgcccgg
atcgccgcctatgcgcaggcgcagggctggcaggtcgaggcggtcatccacagcgagaac
ggcgtcttgccggtcgtccatggcggcgatttcgaccgcttctggccggaggcggaccct
gtggcgcggctgggggtgaaggcggccatgttccagcccatgaccggctattccctgccc
gatgcggtgcgcttcgcgctgcgcctggcggacgaatggccgatggaggggcgcctgctg
gcgcatgtgacgcgtgaatgggccgccatccattggcggcaggggcgctattaccggctg
ctcggccgcatgctgttcggcgcggcccggcccgggcaacgctggcgcatcttcgagcgt
ttctatcggcttggcccttccctgatcggtcgattttatgcggggcgctccacgctcggg
gatcgcatccgcatcttgtgcgggcggcccccggtgcccataagggacgccatgcgagca
ttgctgaaccctcccgcctga
DBGET
integrated database retrieval system
