Uncultured Sphingopyxis sp. UC10: SPPYR_2311
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Entry
SPPYR_2311 CDS
T05531
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPPYR_2311 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphu01007
]
SPPYR_2311 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphu03016
]
SPPYR_2311 (lysS)
Enzymes [BR:
sphu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SPPYR_2311 (lysS)
Amino acid related enzymes [BR:
sphu01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SPPYR_2311 (lysS)
Transfer RNA biogenesis [BR:
sphu03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SPPYR_2311 (lysS)
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
SBV33431
UniProt:
A0A1Y5PTX2
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All DBs
Position
SPPYR:complement(2448848..2450449)
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AA seq
533 aa
AA seq
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MTDLHLHPSLREPAQTSKAWPFEEARKLVKRYPGGKPAGAPVLFETGYGPSGLPHIGTFN
EVLRTTMVRRAYEALTGGAATRLVAFSDDMDGLRKVPDNVPQQDMLREYLGKPLTAIPDP
FGKYESFAHHNNAMLREFLDRFGFEYEFVSSTERYKAGAFDAALKNVLRHNQDILDIMLP
TLRAERAATYSPILPVSPKSGIVLQVPVTVVDADAGLVSFEDEGETITHSILGGGAKLQW
KVDWAMRWVALGVDYEMYGKDLTDSGVQSGKIAKALGGRKPEGLIYEMFLDEKGEKISKS
KGNGLSIEEWLSYGSEESLAFFAFREPKAAKQLHIGVVPKAVDEYLQMRGNYPAQEPDKK
LGNPVHHVHVARGQDVPATELPVTFGLLLNLVGVMGADASKEQIWRYLGQYVAGADATSY
PELDRLIDNAMAYNRDFVAPTLNRRKPAGGEGAALRELDAKLAALPADASADDIQNIVYE
IGKNEAYGFENLRDWFKALYETLLGSSAGPRMGSFIALFGIDNTRRLIAEALA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttgcaccttcatccttcgctgcgcgagcccgcgcaaacgtccaaggcctgg
ccgttcgaggaagcgcgcaagctggtcaaacgctatccggggggcaagccagcgggtgcc
cccgtgctgttcgagaccggctatggtccgtcggggttgccgcatatcggcaccttcaac
gaagtgctgcgcacgacgatggtccgccgcgcctatgaggcgctgaccggcggcgccgcg
acgcggctcgtcgcgttcagcgacgacatggacgggctgcgcaaggttcccgacaatgtg
ccgcagcaggatatgctacgcgaatatctgggcaagccgctcaccgcgatccccgatccg
ttcggcaagtatgagagtttcgcgcatcataacaatgcgatgctgcgcgagtttctcgac
cgtttcggcttcgaatatgaattcgtcagctcgaccgagcgatataaggcaggcgctttc
gacgcggcgctgaagaatgtgctgcgccacaatcaggacattctcgacatcatgctgccg
acgctgcgcgccgagcgcgccgcgacctattcgccgatcctgccggtcagcccgaagtcg
ggaatcgtgctgcaggtaccggtgacggtggtcgatgccgatgccggtctcgtgtcgttc
gaggacgagggcgagacgatcacgcattcgatcctcggcggcggcgccaagctgcagtgg
aaggtcgactgggcgatgcgctgggtcgcgctcggcgtcgattacgagatgtacggcaag
gatctgaccgacagcggcgtccagtcgggcaagatcgccaaggcgctcggcggacgcaag
cccgaggggctgatctatgaaatgttcctcgacgaaaagggcgagaagatttcgaagtcg
aagggcaacggcctctcgatcgaggaatggctgagctatggcagcgaggaaagcctcgcc
ttctttgcgttccgcgagcccaaggcggcgaagcagctccatatcggcgtcgtgcccaag
gcggtcgatgaatatctgcagatgcgcggcaattatccggcgcaggaacccgacaagaag
ctcggcaatccggtgcatcatgttcatgtcgcgcgggggcaggatgtgccggcaaccgaa
ctgccggtgaccttcgggctgctgctcaacctcgtcggggtgatgggcgccgatgcgtcg
aaggagcagatctggcgctacctcggccaatatgtcgcgggcgccgatgcgacgagctat
cccgaactcgaccggctgatcgacaatgcgatggcgtataaccgcgatttcgtcgcgccg
acgctgaaccgccgcaagcccgcgggcggcgagggggcggccttgcgcgaactcgacgcc
aagctcgcagcgctgcccgccgatgcttccgccgacgatattcagaacatcgtgtacgag
atcggcaagaacgaggcctatggctttgaaaatctgcgcgattggttcaaggcgctctat
gagaccctgctcggatcgagcgcggggccgcgcatgggcagcttcatcgcgctgttcggc
atcgacaacacgcggcggctgatcgccgaggccttggcgtaa
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