KEGG   Uncultured Sphingopyxis sp. UC10: SPPYR_2311
Entry
SPPYR_2311        CDS       T05531                                 
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
sphu  Uncultured Sphingopyxis sp. UC10
Pathway
sphu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sphu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SPPYR_2311 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sphu01007]
    SPPYR_2311 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sphu03016]
    SPPYR_2311 (lysS)
Enzymes [BR:sphu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     SPPYR_2311 (lysS)
Amino acid related enzymes [BR:sphu01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   SPPYR_2311 (lysS)
Transfer RNA biogenesis [BR:sphu03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SPPYR_2311 (lysS)
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1g tRNA-synt_1b Anticodon_2
Other DBs
NCBI-ProteinID: SBV33431
UniProt: A0A1Y5PTX2
LinkDB
Position
SPPYR:complement(2448848..2450449)
AA seq 533 aa
MTDLHLHPSLREPAQTSKAWPFEEARKLVKRYPGGKPAGAPVLFETGYGPSGLPHIGTFN
EVLRTTMVRRAYEALTGGAATRLVAFSDDMDGLRKVPDNVPQQDMLREYLGKPLTAIPDP
FGKYESFAHHNNAMLREFLDRFGFEYEFVSSTERYKAGAFDAALKNVLRHNQDILDIMLP
TLRAERAATYSPILPVSPKSGIVLQVPVTVVDADAGLVSFEDEGETITHSILGGGAKLQW
KVDWAMRWVALGVDYEMYGKDLTDSGVQSGKIAKALGGRKPEGLIYEMFLDEKGEKISKS
KGNGLSIEEWLSYGSEESLAFFAFREPKAAKQLHIGVVPKAVDEYLQMRGNYPAQEPDKK
LGNPVHHVHVARGQDVPATELPVTFGLLLNLVGVMGADASKEQIWRYLGQYVAGADATSY
PELDRLIDNAMAYNRDFVAPTLNRRKPAGGEGAALRELDAKLAALPADASADDIQNIVYE
IGKNEAYGFENLRDWFKALYETLLGSSAGPRMGSFIALFGIDNTRRLIAEALA
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgactgacttgcaccttcatccttcgctgcgcgagcccgcgcaaacgtccaaggcctgg
ccgttcgaggaagcgcgcaagctggtcaaacgctatccggggggcaagccagcgggtgcc
cccgtgctgttcgagaccggctatggtccgtcggggttgccgcatatcggcaccttcaac
gaagtgctgcgcacgacgatggtccgccgcgcctatgaggcgctgaccggcggcgccgcg
acgcggctcgtcgcgttcagcgacgacatggacgggctgcgcaaggttcccgacaatgtg
ccgcagcaggatatgctacgcgaatatctgggcaagccgctcaccgcgatccccgatccg
ttcggcaagtatgagagtttcgcgcatcataacaatgcgatgctgcgcgagtttctcgac
cgtttcggcttcgaatatgaattcgtcagctcgaccgagcgatataaggcaggcgctttc
gacgcggcgctgaagaatgtgctgcgccacaatcaggacattctcgacatcatgctgccg
acgctgcgcgccgagcgcgccgcgacctattcgccgatcctgccggtcagcccgaagtcg
ggaatcgtgctgcaggtaccggtgacggtggtcgatgccgatgccggtctcgtgtcgttc
gaggacgagggcgagacgatcacgcattcgatcctcggcggcggcgccaagctgcagtgg
aaggtcgactgggcgatgcgctgggtcgcgctcggcgtcgattacgagatgtacggcaag
gatctgaccgacagcggcgtccagtcgggcaagatcgccaaggcgctcggcggacgcaag
cccgaggggctgatctatgaaatgttcctcgacgaaaagggcgagaagatttcgaagtcg
aagggcaacggcctctcgatcgaggaatggctgagctatggcagcgaggaaagcctcgcc
ttctttgcgttccgcgagcccaaggcggcgaagcagctccatatcggcgtcgtgcccaag
gcggtcgatgaatatctgcagatgcgcggcaattatccggcgcaggaacccgacaagaag
ctcggcaatccggtgcatcatgttcatgtcgcgcgggggcaggatgtgccggcaaccgaa
ctgccggtgaccttcgggctgctgctcaacctcgtcggggtgatgggcgccgatgcgtcg
aaggagcagatctggcgctacctcggccaatatgtcgcgggcgccgatgcgacgagctat
cccgaactcgaccggctgatcgacaatgcgatggcgtataaccgcgatttcgtcgcgccg
acgctgaaccgccgcaagcccgcgggcggcgagggggcggccttgcgcgaactcgacgcc
aagctcgcagcgctgcccgccgatgcttccgccgacgatattcagaacatcgtgtacgag
atcggcaagaacgaggcctatggctttgaaaatctgcgcgattggttcaaggcgctctat
gagaccctgctcggatcgagcgcggggccgcgcatgggcagcttcatcgcgctgttcggc
atcgacaacacgcggcggctgatcgccgaggccttggcgtaa

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