Sphingorhabdus sp. YGSMI21: CHN51_00895
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Entry
CHN51_00895 CDS
T05308
Symbol
ligA
Name
(GenBank) protocatechuate 4,5-dioxygenase subunit alpha
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00362
Benzoate degradation
sphy00624
Polycyclic aromatic hydrocarbon degradation
sphy00627
Aminobenzoate degradation
sphy01100
Metabolic pathways
sphy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CHN51_00895 (ligA)
00627 Aminobenzoate degradation
CHN51_00895 (ligA)
00624 Polycyclic aromatic hydrocarbon degradation
CHN51_00895 (ligA)
Enzymes [BR:
sphy01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
CHN51_00895 (ligA)
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Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
ATW02246
UniProt:
A0A2D3R996
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Position
complement(198125..198532)
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AA seq
135 aa
AA seq
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MTEQNIHEYLSDLDDIPGTRVYTASRARQGYHLNQFAMSLMKPENRERWKADERAYLADW
KLSDAQRQAVLDRDYNRLLELGGNIYYLAKVFSTDGLSFVQAVSSMTGMSVEDYQAMMMA
GGRPAEGNRSIREGN
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagaatatccacgaatatctcagcgatctggacgatatccccggtacgcgc
gtctatacagcatcgcgcgcgcgacagggctatcatctgaaccagtttgccatgagcctg
atgaaacccgagaatcgagaacgctggaaggcggacgaaagagcctatctcgccgactgg
aaattgtccgacgcgcaacgccaggcggtgctcgatcgcgactataaccgcctgctcgag
ctcggcggcaatatctactatctcgccaaggtcttctcgaccgacggcctgtccttcgta
caggctgtctcttcgatgacggggatgagcgtcgaggattatcaggcgatgatgatggcg
ggcgggcggccggccgaaggcaatcgctcgatcagggaaggcaactga
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