Sphingorhabdus sp. YGSMI21: CHN51_04630
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Entry
CHN51_04630 CDS
T05308
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00020
Citrate cycle (TCA cycle)
sphy00785
Lipoic acid metabolism
sphy01100
Metabolic pathways
sphy01110
Biosynthesis of secondary metabolites
sphy01120
Microbial metabolism in diverse environments
sphy01200
Carbon metabolism
sphy01210
2-Oxocarboxylic acid metabolism
Module
sphy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CHN51_04630
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CHN51_04630
Enzymes [BR:
sphy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CHN51_04630
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
Motif
Other DBs
NCBI-ProteinID:
ATW02894
UniProt:
A0A2D3RB04
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All DBs
Position
complement(969621..972404)
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AA seq
927 aa
AA seq
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MGFENQDFIGSEQEQGPSWQRKHWPVDDADELTSALDPTKMGIEIKASAEKSGKSMSDAE
VAQAAEKSIRAMMLIRTYRVRGHLGANLDPLGLSKLEEPADLTPEFHGFTAEDMDKPVYL
GGVLGFQTATVREIEAVLRANYCGPVGLEYMHIADIEERRFLQERMEGKDAEIHFTPEGK
KAILNKVIEGEEYENFLGKKYVGTKRFGLDGGESMLPALENVIKYGGQSGVRDIVYGMAH
RGRLNILANVMAKPYKVIFHEFHGGSANPDDVGGSGDVKYHLGTSTDREFDGINVHMSLV
PNPSHLEAVDPVVLGKVRAQQVARDDLEKHDQVLPVLIHGDAAFAGQGIVWECLGFSGIR
GYNTGGCIHFVINNQIGFTTSPQFARSSPYPSDVAKGVQAPIFHVNGDDPEAVTFACKIA
IEFRQRFGRDIVIDMWCYRRFGHNEGDEPSFTQPIMYAAIKKHPKVSKLYEARLVEEGVI
DAGWADTTRKAFADHLETEFQAAADYKADKADWFGGRWQGLHIPADPETARRNVETAIDP
KLFDSLGRTLTRVPEGLTIHKTLGRVLNAKAEMFKSGENFDWATGEALAYGSLVSEGYNV
RLSGQDSGRGTFSQRHAVWVDQKSEEKYVPLSTVPHGRFEVLDSPLSEYGVLGFEYGYAG
ADPKTLVLWEAQFGDFANGAQIMIDQFIASGEAKWLRANGLVMLLPHGYEGQGPEHSSAR
LERFLQLCAQDNIQVANITTPANYFHVLRRQMLRSFRKPLIIMTPKSLLRHKLAVSKAED
FQGDHHFMRILSDTNPPADEDVKRLVLCSGKVAYDLIEARDAAGDKNTAIIRIEQLYPFP
GEPLVVRLKRMTGLETVVWAQEEPKNNGSWHFVRSYLEDCLEQANVGPVEPVYAGRSASA
SPATGLASRHKQQQERLIAEALGHAVS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaaaatcaggattttatcggctcggaacaggagcagggcccgagctggcag
cgcaagcactggccggttgatgacgccgacgagctgaccagcgcgctcgatcccacaaaa
atgggcatcgagatcaaggcttctgccgagaaatccggcaagtcgatgtccgatgccgaa
gttgcccaggcggcggaaaagtcgatccgggcgatgatgctgatccgcacctatcgggtg
cgtggacatctgggtgccaatcttgatcctctgggtctttccaagctcgaggagccggcg
gacctgacgcccgaattccacggcttcaccgccgaggatatggacaagccggtctatctg
ggcggcgtgctcggctttcagaccgcgaccgtgcgcgagatcgaggcggtgttgcgcgcc
aattattgtggtccggtcgggctcgaatatatgcatattgccgatatcgaggaacggcgc
ttcctgcaggagcggatggaaggcaaggacgccgagatccacttcacgccggaaggcaag
aaggcgattctcaacaaggtgatcgagggcgaggaatatgaaaatttcctcggcaagaaa
tatgtcgggaccaagcgtttcggtctcgatggcggcgaatcgatgctgccggcgctggaa
aatgtcatcaaatatggcggccagtccggcgtccgcgacattgtctatggcatggcccac
cgggggcgtttgaacattctcgccaatgtgatggccaagccttacaaggtcatcttccac
gaatttcacggtggctcggccaatcctgacgatgtcggcggctcgggcgatgtgaaatat
catctcggcaccagcaccgaccgcgaatttgacggcatcaatgtccatatgagcctggtg
cccaacccgtcgcatctcgaggcggtcgatccggtcgtgctcggcaaggtccgcgcgcaa
caggtggcgcgcgacgatctggaaaaacatgaccaggtgttgccggtgctgatccacggc
gatgctgccttcgcgggacagggcattgtctgggaatgcctcggcttctccggcatccgc
ggctataataccggcggctgcatccatttcgtgatcaacaaccagatcggtttcacgacc
agcccgcaattcgcgcgcagctcgccttatccgtcggacgtcgccaagggcgtgcaggca
ccgattttccacgtcaacggcgatgatccggaggcggtgacctttgcctgcaagatcgcg
atcgagttccgccagcgtttcggccgggatatcgtgatcgacatgtggtgctatcgccgc
tttggccataatgaaggcgacgagccgagcttcacccagccgatcatgtatgccgcgatc
aagaaacatcccaaggtcagcaagctctacgaagcgcggctggtcgaggaaggcgtgatc
gatgcgggctgggccgatacgacccggaaagcctttgccgaccatctcgaaaccgaattc
caggcggcggccgattacaaggccgacaaggccgactggttcggcggacgctggcagggg
ctgcatattccggccgatccggaaaccgcacggcgcaatgtcgagacggcgattgacccg
aaactgttcgacagtctcggccggacgctgaccagagtccccgaagggctgaccattcac
aagacattgggccgggtgctcaacgccaaggccgagatgttcaagagcggcgagaatttc
gactgggcaaccggcgaagcgctggcttacggatcgctggtttccgaaggctataatgtt
cgcctgtctggtcaggacagcggccgcggaaccttttcccagcgccacgccgtctgggtc
gaccagaaaagcgaagaaaaatatgtgccgctgagcacggtgccgcacggccggttcgaa
gtgctcgacagtccgctctccgaatatggcgtgctcggcttcgaatatggctatgccggt
gccgatccgaaaactttggtattgtgggaagcgcaattcggcgattttgccaatggcgcg
cagatcatgatcgaccagttcatcgcctcgggcgaagccaaatggctgcgcgccaacggt
ctggtgatgctgctgccgcatggctatgagggccagggtccggaacatagttcggcgcgg
ctcgaacgcttcctgcagctttgtgcgcaggacaatatccaggtcgccaatatcaccaca
ccggccaattatttccatgtgttgcgccggcagatgctgcggtctttccgcaagccgctg
atcatcatgacgccgaaatcgctgctgcgccacaagctggccgtatcgaaggcagaagat
ttccagggcgaccatcatttcatgcggatattgtcggacaccaacccgcccgcggacgag
gatgtgaagcgtcttgtgctctgctcgggcaaggtcgcctatgacctgatcgaggcgcgc
gacgcggcgggtgacaagaacacggcgatcatccggatcgagcagctctatcccttcccg
ggcgagccgctggtggtccggctgaaacggatgaccggtctggagaccgtggtctgggcg
caggaagaaccgaagaataacggcagctggcattttgtccgctcctatctggaagactgt
ctggaacaggcgaacgtcggaccagtggagccggtctatgccggacgctccgcttcggct
tcgccggcgacgggtctggcgtcccggcacaagcaacagcaggagcggctgatcgccgaa
gcgctggggcatgcagtcagctaa
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