Sphingorhabdus sp. YGSMI21: CHN51_06855
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Entry
CHN51_06855 CDS
T05308
Name
(GenBank) ubiquinone biosynthesis protein UbiD
KO
K01612
vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.-
4.1.1.61
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00627
Aminobenzoate degradation
sphy01120
Microbial metabolism in diverse environments
sphy01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
CHN51_06855
Enzymes [BR:
sphy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.61 4-hydroxybenzoate decarboxylase
CHN51_06855
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Gene cluster
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Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ATW03291
UniProt:
A0A2D3RC70
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All DBs
Position
complement(1403467..1404921)
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AA seq
484 aa
AA seq
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MNDLANRARDISSLRDFLELLESEGQAITWSERVMPEPDLRNIAVAASRDANGAPAIIFD
NMVGYPGKRTVVGVHGSWDNIALLLGRPKGTTIRELFFEIAGRWGDAEAQISYVPEGQAP
VHECRTESGINLYDILPVYRINEYDGGFFLGKASVASRDPEDPENFGKQNVGIYRLQLQG
PDCFSLMTIPSHDMGRQIMAAERTGLPLKIAVMLGNHPGLAVFAATPIGYEESEYAYASA
MMGAPIRLSKSGNGVDILADSEIVIEAEMQLGERVLEGPFGEFPGSYSGVRKAPLFKVTA
VSHRRDPIFENIYIGRGWTEHDTLIGLHTSAPIYAQLRKDFPEVTAVNALYQHGLTGIIS
VKNRMAGFAKTVAMRALSTPHGVMYLKNLIMVDADVDPFDLNQVMWALSTRTRADDIIVL
PNMPAVPIDPSAVVPGKGHRLIIDATSFMRPDPIGEAHLVNPPTGPDIDALSKAIRILQQ
GAAK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatctggcgaatagagcgcgcgacatttcctcattgcgggattttctggaactt
ctcgaaagcgaaggccaggcaatcacctggagcgagcgggtgatgccggaaccagacctg
cgcaatatcgcggtcgcggcctcacgcgacgccaatggcgcgccggcgatcatattcgac
aatatggtcggctatcccggcaagcggaccgtggtcggtgtccacggttcgtgggacaat
atcgcgctgctgttgggacgcccgaagggcacgacaatccgcgaactgttcttcgagatc
gccggccgctggggcgatgccgaagcccagatcagttacgttcccgaagggcaggcaccg
gtccatgaatgccggaccgaaagcgggatcaatctttacgatatccttccggtctatcgc
atcaacgaatatgatggcggtttctttctgggcaaggcatcggtagcatcgcgcgatccg
gaagatcccgaaaattttggcaaacagaatgtcggcatctaccggttgcaactgcaaggc
ccggattgcttcagcctgatgactattccgtcgcacgacatgggtcggcaaatcatggcc
gccgaacgcaccggcctgccgctgaagatcgcggtcatgctcggcaaccacccgggactc
gctgttttcgcagccacgccgatcggctacgaggaatccgaatatgcctatgcctctgcg
atgatgggcgcgccgatcaggctgtccaaatcgggcaatggtgtcgatattcttgcggac
agcgaaatcgttatcgaagcggaaatgcagttgggcgagcgcgtactggaaggaccgttc
ggcgaattccccggttcctacagcggggtccgcaaggccccgctcttcaaggtcacggca
gtatcgcatcgccgggatccgattttcgaaaatatctacatcggccgtggctggaccgag
cacgacacgctgatcggattgcacacgtcggcgccgatatatgcacagttgcgcaaggat
tttccagaggtcacggctgtcaacgccctctatcaacatggtctgaccgggatcatttca
gtcaagaaccggatggccggctttgccaagactgtcgccatgcgggcgctgagtacgccg
cacggtgtgatgtacctgaagaatctgatcatggtcgatgccgatgtcgaccccttcgac
ctcaaccaggtgatgtgggcactgtcaacgcgtacccgcgctgacgatattatcgtgctg
cccaacatgcccgccgtgccgatcgatccgtccgcagtcgtgcccggcaagggccaccgg
ctgatcattgacgcgaccagctttatgcgccccgaccccatcggcgaagcgcatcttgtc
aacccgccgaccggtccggacatcgatgcactgagcaaggcgatccggatacttcagcaa
ggagctgcaaaatga
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