Sphingobacterium sp. CZ-2: E3D81_16940
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Entry
E3D81_16940 CDS
T06166
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz00260
Glycine, serine and threonine metabolism
sphz00630
Glyoxylate and dicarboxylate metabolism
sphz00785
Lipoic acid metabolism
sphz01100
Metabolic pathways
sphz01110
Biosynthesis of secondary metabolites
sphz01200
Carbon metabolism
Module
sphz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E3D81_16940 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E3D81_16940 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
E3D81_16940 (gcvP)
Enzymes [BR:
sphz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
E3D81_16940 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
FKBP26_C
Motif
Other DBs
NCBI-ProteinID:
QBR13774
UniProt:
A0A4P7E1M3
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Position
complement(3887069..3889942)
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AA seq
957 aa
AA seq
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MSNVFYQEKFEDRHNGPSSTQVEEMLTVLGVSSLDELIEQTVPAQIRKKEALKLPKALSE
VAYLEKIAQIAEKNKVFKSYIGQGYNDVILPGVIQRNVFENPGWYTQYTPYQAEIAQGRL
QALLNFQTMVSDLTGLEIANASLLDEATAAAEGMFMLYSARKNKDANVFLVTPNIYPQTL
DVLQTRAVPFGVEIRVADLTVENLTDEVFAAFIQYPAADGSIADYKEFTAFAHDKNITIC
VATDLMSLALLTPPGEWGADVVVGNSQRFGVSMGFGGPHAAFFATKDSFKRNIPGRIIGV
TSDSNGEYALRMALQTREQHIRRDKASSNICTAQALLAIMASFYAVYHGPKGIKNIASRI
HDLARLTSKAIQALGYKQTNEAYFDTLRFDVADQFVALKSEALNNELNFFYGEGTVGISI
DETTTFQDVETIVKVFAKVIGKSLNEVDVQSFVDELEVVIPESLERASEYLTHPVFNSYH
SESEMLRYIKSLEAKDLSLCHSMIPLGSCTMKLNATTEMVPVTWARFGGLHPFAPVDQTS
GYMQLINELNDWLCEITGFAKMSFQPNSGAQGEYAGLMVIRAYHHSRGDFDRDICLIPAS
AHGTNPASASMAGLKVVVVKCDERGNIDVEDLKAKATEHAAKLNSLMVTYPSTHGVFEEP
IVEICNIIHENGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGP
IGVAAHLVPFLPNHEVIEISGEEGISAVSAAPFGSASILVISHAYIAMMGGEGLTEATKT
AILNANYIKARLEQHYPVLYAGANGRCAHEMILDCRSFKNVGIEVADIAKRLMDYGFHAP
TVSFPVAGTLMVEPTESESKPELDRFCDALIAIRKEIAAVENGDADQKDNVLKHAPHTAR
VVTGDEWDRPYSRQTAAYPIEYLRVNKFWPSVGRVNDSQGDRTLICSCPPIEAYAEA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtattttaccaagagaaatttgaggatcgccacaacggtccaagctctacg
caagtagaagagatgttaaccgttttaggcgtgagttccttggacgagttgatcgagcag
acagttccagcgcaaattcgtaagaaagaggcattaaagcttccaaaagcacttagcgaa
gtggcttacctggaaaagattgctcaaatcgcagagaagaacaaggttttcaagtcttat
atcggtcaagggtataatgatgtgatccttcctggggttattcagcgtaacgtgtttgaa
aatccaggatggtatacgcaatatacgccctaccaagcggagatcgcacagggccgttta
caggctttgttgaacttccaaacgatggtgtctgatctgaccggattggaaattgctaac
gcttccttattggacgaggctacagcagcagccgaagggatgttcatgttgtacagcgca
cgtaagaacaaggatgccaatgtatttttggttactccaaacatctatccacaaacattg
gatgtattgcaaacaagagcggttccatttggtgtggaaatccgtgttgcagaccttacg
gtagaaaatcttaccgatgaggtctttgctgccttcatccaatatccagcagctgatggt
tccatcgctgattataaagaattcacagcatttgcccatgataaaaacatcacgatctgt
gttgctaccgatttgatgtcattagcgctattgacgcctccaggagaatggggagcagat
gtggtggtaggaaactcccaacgctttggtgtatcaatgggttttggtggtcctcatgcg
gcattctttgctacaaaagatagcttcaaacgtaacattcctggacgtatcatcggggta
acctcggattcgaatggggaatacgcgttgcgtatggctttacagacccgtgagcaacat
atccgtagagataaggcatcttccaatatctgtacagcacaggcattattggcaattatg
gcctctttctacgcggtttaccacggtccaaaaggcattaagaacattgcatcaagaatc
catgaccttgctcgtttgacttctaaagccatccaagcattgggctataaacaaaccaac
gaagcttatttcgataccttacgtttcgatgtagcggatcagtttgtggcgttgaagtct
gaagcgttgaacaacgaattgaacttcttctatggcgaaggtaccgtagggatctccatc
gacgaaacaacgactttccaagatgtggaaaccatcgtaaaagtatttgctaaggtaatt
ggcaagtccttgaacgaagtggatgtacagagctttgtagacgaattagaggtggttatt
ccggagagcctagagcgcgcttcagaataccttacccaccctgttttcaacagctaccac
tctgaaagtgagatgcttcgttacatcaaatcattggaagctaaggatctttctttatgc
cattcgatgattcctttgggatcttgtacgatgaaattgaatgcaactacggaaatggtt
cctgtaacatgggcccgttttggtggtctgcatccatttgctccggttgaccaaacaagt
ggttacatgcaattgatcaacgaattgaacgattggttatgtgagatcaccggatttgca
aaaatgtccttccaaccaaactctggtgcacaaggtgaatatgctggattaatggtaatc
cgtgcttaccaccatagccgtggagattttgatagagatatctgtttgatccctgcttcg
gcacacggtaccaaccctgcatctgcttctatggccggattgaaagtggttgtggtaaaa
tgtgatgaacgtggaaacattgatgtggaagaccttaaggcaaaagcaacagagcatgct
gctaagttgaactcgttaatggtgacttatccatctacccacggtgtatttgaagagccg
attgtagagatctgtaatatcatccatgaaaatggtggtcaggtgtatatggatggtgcg
aacatgaatgcgcaggttggattgaccagcccaggttatattggcgcagacgtttgtcac
ttgaacttacacaaaaccttctgtattccacatggtggtggtggtcctggtatgggtcct
atcggtgtggcagcacacttggtaccattcttacctaaccatgaggttattgagatctct
ggcgaggaaggtatttccgcagtttctgcggctccattcggttcggcttccatcttggtt
atctctcatgcttacatcgctatgatgggcggagaaggcctgacagaagctaccaaaaca
gcgatcttaaatgccaactatatcaaagctcgtttagaacaacattatccggtattgtat
gcgggtgccaacggtcgttgtgcgcacgagatgatcttggattgtcgttctttcaaaaac
gtaggtattgaagtagcggatatcgcgaaacgtttaatggactatggattccatgcccca
acggtttctttccctgtggcaggtaccttaatggttgaaccaaccgagtcggaatctaaa
ccagaattagatcgtttctgtgatgccttgatcgctatccgtaaagaaattgctgcggtt
gaaaatggcgatgcggatcaaaaagacaacgtacttaagcatgcgccacatacagcgcgc
gtagtaactggtgatgagtgggatagaccttattcccgtcagactgcagcttatccaatc
gaatatttgagagtgaataaattctggccttctgtaggtagggtgaatgattctcaagga
gacagaaccttgatctgttcttgtcctccaatcgaagcttacgcggaagcataa
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