Sphingobacterium sp. CZ-2: E3D81_16940
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Entry
E3D81_16940 CDS
T06166
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz00260
Glycine, serine and threonine metabolism
sphz00630
Glyoxylate and dicarboxylate metabolism
sphz00670
One carbon pool by folate
sphz00785
Lipoic acid metabolism
sphz01100
Metabolic pathways
sphz01110
Biosynthesis of secondary metabolites
sphz01200
Carbon metabolism
Module
sphz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E3D81_16940 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E3D81_16940 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
E3D81_16940 (gcvP)
00670 One carbon pool by folate
E3D81_16940 (gcvP)
Enzymes [BR:
sphz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
E3D81_16940 (gcvP)
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Ortholog
Paralog
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QBR13774
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Position
complement(3887069..3889942)
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AA seq
957 aa
AA seq
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MSNVFYQEKFEDRHNGPSSTQVEEMLTVLGVSSLDELIEQTVPAQIRKKEALKLPKALSE
VAYLEKIAQIAEKNKVFKSYIGQGYNDVILPGVIQRNVFENPGWYTQYTPYQAEIAQGRL
QALLNFQTMVSDLTGLEIANASLLDEATAAAEGMFMLYSARKNKDANVFLVTPNIYPQTL
DVLQTRAVPFGVEIRVADLTVENLTDEVFAAFIQYPAADGSIADYKEFTAFAHDKNITIC
VATDLMSLALLTPPGEWGADVVVGNSQRFGVSMGFGGPHAAFFATKDSFKRNIPGRIIGV
TSDSNGEYALRMALQTREQHIRRDKASSNICTAQALLAIMASFYAVYHGPKGIKNIASRI
HDLARLTSKAIQALGYKQTNEAYFDTLRFDVADQFVALKSEALNNELNFFYGEGTVGISI
DETTTFQDVETIVKVFAKVIGKSLNEVDVQSFVDELEVVIPESLERASEYLTHPVFNSYH
SESEMLRYIKSLEAKDLSLCHSMIPLGSCTMKLNATTEMVPVTWARFGGLHPFAPVDQTS
GYMQLINELNDWLCEITGFAKMSFQPNSGAQGEYAGLMVIRAYHHSRGDFDRDICLIPAS
AHGTNPASASMAGLKVVVVKCDERGNIDVEDLKAKATEHAAKLNSLMVTYPSTHGVFEEP
IVEICNIIHENGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGP
IGVAAHLVPFLPNHEVIEISGEEGISAVSAAPFGSASILVISHAYIAMMGGEGLTEATKT
AILNANYIKARLEQHYPVLYAGANGRCAHEMILDCRSFKNVGIEVADIAKRLMDYGFHAP
TVSFPVAGTLMVEPTESESKPELDRFCDALIAIRKEIAAVENGDADQKDNVLKHAPHTAR
VVTGDEWDRPYSRQTAAYPIEYLRVNKFWPSVGRVNDSQGDRTLICSCPPIEAYAEA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtattttaccaagagaaatttgaggatcgccacaacggtccaagctctacg
caagtagaagagatgttaaccgttttaggcgtgagttccttggacgagttgatcgagcag
acagttccagcgcaaattcgtaagaaagaggcattaaagcttccaaaagcacttagcgaa
gtggcttacctggaaaagattgctcaaatcgcagagaagaacaaggttttcaagtcttat
atcggtcaagggtataatgatgtgatccttcctggggttattcagcgtaacgtgtttgaa
aatccaggatggtatacgcaatatacgccctaccaagcggagatcgcacagggccgttta
caggctttgttgaacttccaaacgatggtgtctgatctgaccggattggaaattgctaac
gcttccttattggacgaggctacagcagcagccgaagggatgttcatgttgtacagcgca
cgtaagaacaaggatgccaatgtatttttggttactccaaacatctatccacaaacattg
gatgtattgcaaacaagagcggttccatttggtgtggaaatccgtgttgcagaccttacg
gtagaaaatcttaccgatgaggtctttgctgccttcatccaatatccagcagctgatggt
tccatcgctgattataaagaattcacagcatttgcccatgataaaaacatcacgatctgt
gttgctaccgatttgatgtcattagcgctattgacgcctccaggagaatggggagcagat
gtggtggtaggaaactcccaacgctttggtgtatcaatgggttttggtggtcctcatgcg
gcattctttgctacaaaagatagcttcaaacgtaacattcctggacgtatcatcggggta
acctcggattcgaatggggaatacgcgttgcgtatggctttacagacccgtgagcaacat
atccgtagagataaggcatcttccaatatctgtacagcacaggcattattggcaattatg
gcctctttctacgcggtttaccacggtccaaaaggcattaagaacattgcatcaagaatc
catgaccttgctcgtttgacttctaaagccatccaagcattgggctataaacaaaccaac
gaagcttatttcgataccttacgtttcgatgtagcggatcagtttgtggcgttgaagtct
gaagcgttgaacaacgaattgaacttcttctatggcgaaggtaccgtagggatctccatc
gacgaaacaacgactttccaagatgtggaaaccatcgtaaaagtatttgctaaggtaatt
ggcaagtccttgaacgaagtggatgtacagagctttgtagacgaattagaggtggttatt
ccggagagcctagagcgcgcttcagaataccttacccaccctgttttcaacagctaccac
tctgaaagtgagatgcttcgttacatcaaatcattggaagctaaggatctttctttatgc
cattcgatgattcctttgggatcttgtacgatgaaattgaatgcaactacggaaatggtt
cctgtaacatgggcccgttttggtggtctgcatccatttgctccggttgaccaaacaagt
ggttacatgcaattgatcaacgaattgaacgattggttatgtgagatcaccggatttgca
aaaatgtccttccaaccaaactctggtgcacaaggtgaatatgctggattaatggtaatc
cgtgcttaccaccatagccgtggagattttgatagagatatctgtttgatccctgcttcg
gcacacggtaccaaccctgcatctgcttctatggccggattgaaagtggttgtggtaaaa
tgtgatgaacgtggaaacattgatgtggaagaccttaaggcaaaagcaacagagcatgct
gctaagttgaactcgttaatggtgacttatccatctacccacggtgtatttgaagagccg
attgtagagatctgtaatatcatccatgaaaatggtggtcaggtgtatatggatggtgcg
aacatgaatgcgcaggttggattgaccagcccaggttatattggcgcagacgtttgtcac
ttgaacttacacaaaaccttctgtattccacatggtggtggtggtcctggtatgggtcct
atcggtgtggcagcacacttggtaccattcttacctaaccatgaggttattgagatctct
ggcgaggaaggtatttccgcagtttctgcggctccattcggttcggcttccatcttggtt
atctctcatgcttacatcgctatgatgggcggagaaggcctgacagaagctaccaaaaca
gcgatcttaaatgccaactatatcaaagctcgtttagaacaacattatccggtattgtat
gcgggtgccaacggtcgttgtgcgcacgagatgatcttggattgtcgttctttcaaaaac
gtaggtattgaagtagcggatatcgcgaaacgtttaatggactatggattccatgcccca
acggtttctttccctgtggcaggtaccttaatggttgaaccaaccgagtcggaatctaaa
ccagaattagatcgtttctgtgatgccttgatcgctatccgtaaagaaattgctgcggtt
gaaaatggcgatgcggatcaaaaagacaacgtacttaagcatgcgccacatacagcgcgc
gtagtaactggtgatgagtgggatagaccttattcccgtcagactgcagcttatccaatc
gaatatttgagagtgaataaattctggccttctgtaggtagggtgaatgattctcaagga
gacagaaccttgatctgttcttgtcctccaatcgaagcttacgcggaagcataa
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