Sphingomonas piscis: G7077_12165
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Entry
G7077_12165 CDS
T07460
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spii
Sphingomonas piscis
Brite
KEGG Orthology (KO) [BR:
spii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spii03009
]
G7077_12165 (rimO)
Enzymes [BR:
spii01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G7077_12165 (rimO)
Ribosome biogenesis [BR:
spii03009
]
Prokaryotic type
ribosomal protein modification factors
G7077_12165 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Rep_fac-A_3
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QIK80091
UniProt:
A0A6G7YTP1
LinkDB
All DBs
Position
complement(2383457..2384782)
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AA seq
441 aa
AA seq
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MSLPQAPKVGLVSLGCPKNLVDSERIMTKLRSDGYSMSADYAGADVVLVNTCGFLDSAKE
ESLEAIGEAIAENGRVIVTGCMGKEADVIRNRFPNVLAITGAHQYEEVVGAVYDAAPMPP
NAFINLVPDSGLKLTPRHYSYLKISEGCNHRCAFCIIPSLRGDLASRRPDAILREAEKLI
AAGIKELLVISQDTSAYGVDLKHASWRWKGGEVRAHMTDLARALGELGAWVRLHYVYPYP
HVDRVIPLMAEGLVLPYLDIPFQHASPNVLRAMRRPANEAKVLERIRSWREICPDIAIRS
SFVVGFPGETEEDFDYLLRWLEEAQLDRVGAFRFEPVEGAAANNLPGHVPEEVKEERYAR
VMELTARISAEKLAAKVGRTVDVIIDAVDPDTGGATGRSKADAPEIDGEVHLRDAGHLAA
GDIVEVTVEDADEHDLYGVPA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttccgcaagcccccaaggtgggcctggtctcgctcggctgtcccaagaatctg
gtcgacagcgagcggatcatgaccaagctgcgctccgacggctattcgatgtcggccgat
tatgcgggcgccgacgtggtgctggtcaacacttgcggctttctcgattccgccaaggag
gagagcctggaagcgatcggcgaagccatcgccgagaatgggcgggtgatcgtcaccggc
tgcatgggcaaggaagcggacgtgatccggaaccgcttccccaacgtgctcgcgatcacc
ggcgcccaccagtatgaagaggtggtcggcgccgtctacgacgccgcgccgatgccgccc
aacgccttcatcaacctggtgcccgacagcgggctgaagctgactccgcggcactatagc
tacctgaagatctcggaaggttgcaaccaccgctgcgccttctgcatcatcccgagcctg
cgcggtgatctcgccagccgccgtcccgacgcgatcctccgcgaggccgagaagctgatc
gcggcgggcattaaggaactgctggtcatcagccaggacacgtcggcctatggcgtcgac
ctgaagcatgccagctggcgctggaagggcggcgaggtgcgcgcccacatgacggatctg
gcgcgcgcgctgggcgagctcggcgcctgggttcgcctgcattacgtttacccctacccg
cacgtcgatcgagtcattccgctgatggcggaggggctggttctcccctacctcgacatc
cccttccagcacgctagcccgaacgtgcttcgtgccatgcggcgccccgccaacgaggcg
aaggtgcttgagcggatccgctcgtggcgcgagatctgccccgacatcgccatccgctcc
agcttcgtcgtcggcttccccggcgagacggaagaggatttcgattatctcctccgctgg
ctggaggaggcgcaactcgaccgcgtcggcgccttccgcttcgagccggtcgagggtgcc
gcggccaacaacctgcccgggcacgtgccggaggaggtcaaggaagaacgctacgcccgg
gtgatggaactgaccgcccggatcagcgcagagaaactcgcggccaaagtcgggcgcacc
gtggacgtcatcatcgatgcggtcgatccggacaccggcggcgccaccggccgctccaag
gccgacgcgccggaaatcgacggcgaagtccacctgcgggatgccggccatctcgccgcg
ggagacatcgtcgaggtcaccgtcgaggatgcggacgagcacgacctttacggcgtgccc
gcctag
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