Stylophora pistillata (Smooth Cauliflower Coral): 111338428
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Entry
111338428 CDS
T05774
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111338428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spis03400
]
111338428
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111338428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_II
MutS_IV
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
111338428
NCBI-ProteinID:
XP_022800659
EnsemblRapid:
LOC111338428
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MATLFSYFTPKSKKPSSPVCGDTADKKKNNSPKEGAKGFSPINDKKSTSPKAPKASRTLK
DSSGESGPVKIEQCGIVWAKLEGHPWWPSLICDHPSQGVFERGDECHVQFFGDPPSRAWV
KRRQVKQFLKDQNNRVTDPHIKKAVQQAEDALSLSLERRKKLVNCLPSDEEDAEDACDET
MLSDDESPEKESNIQKRKNSGGRSRNDTSDEKDDDDEVTGRKYKSKRPRRKATAKNNRVK
KRRIIESGSEDSADDYKPDRDDDDDDESCSSGVDENELEEDSPSEEDIDDIAEMPSRKRK
RGSTSTTHQKKTKSSAPSTPCTPVVSKQAVPSTPSPSVLSGSLAKKMSSSASKAAVSLAR
FQMNSSPVPKASAADGAGVGTYTHQRLEWLKEDRRKDKHGRPMAHPEYDSRTLLVPSSFL
NSKDVTPAMKQWWQLKSDNFDTILFFKVGKFYELYNMDATVGVKELGLIYMKGNFAHAGF
PEIAFGRYSDTLIQKGYKVAQVEQTETPEMMKERCKKTHSNSKSDQVVRREICAVITKGT
KTYSFVDGDCTDSDAAYLLAIAEKGSDDVSGGESVYGVCFVDTSIGKFHIGQFKDDRQSS
RLRTLVAHFTPVQVLCPRGGLTLKTQQVLNHELMSAMKEYLTQGSQFWEAGKTLKVLAEE
QYFSEDKNGTENPVKSWPEVLKKLTDGDLLGLMPGEGSELALSALGAVVWYLKKCLIDGE
VLSMGNFEEYLPLDNSPARGQNSSFAKGRQHMILDNITLTNLDIIPSGPDASLEGTLLER
LDHCCTPFGKRLFKQWLCAPLCNPASINDRLNSVEDLMANPSLVAETKDVLKALPDLERL
LKKIHALSLPRDKNHPANRAILYNEDTYSKRKINDFLTILEGFDKATEIAAMFKDHASSF
RSKLLTQVVTEKGITAGQSKVRGQFPKLHDLLHAFKHSFDHNKAKNEGVILPKAGVDPDY
DQALADIQSTRTWFEQYLKKQCAILGCKATYWGSAKNRYQIEIPDSVRKIPDEYTLQSQK
KGFKRYWTAAIEEKLAGLVEAEERREEALKDTMRLVFHKFDQEYKTWDKTVQCLAVLDSL
MSLASCSSQADGSMCRPEIVLPEQTADEEFQPFLEIREGRHPCISRTFSGGDFIPNDTVV
GMQDENDGEERAVNSQSTCVLVTGPNMGGKSTLMRQAGLIVIMAQMGCYVPAENCRLTPV
DRVFTRLGAHDRILSGESTFFVELSETSTILRHATRHSLVLVDELGRGTATYDGTAIACA
VVGELSGHIKCRTLFSTHYHSLVEEFSADPNVRLGHMACMVENEDETDPSKETITFLYKF
VKGACPKSYGFNAARLAGIPDEVISVAVNKARQFEETVDRVKFFRSLLNCKKEDIKQLQK
QIMGY
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctgttttcgtattttactccaaaatctaaaaagccctcgtctcctgtttgc
ggagatacagcagataaaaagaagaataattcgccaaaggaaggcgcaaaggggttttcg
ccgattaacgataagaaatcgacttcgccaaaagcgccgaaagcttcaagaacgctgaaa
gattcgagcggggaatctggcccggtgaaaattgaacaatgtggaattgtatgggcgaaa
ctcgaaggacatccgtggtggccaagtttgatttgtgatcatccttcgcaaggggtgttt
gaacgaggggatgaatgtcatgttcaattttttggagaccctccgagtcgagcttgggta
aagcgaaggcaagtgaaacagtttttgaaagatcaaaataatcgtgtgacagacccacac
attaaaaaagcagtgcaacaagcagaggatgccctgtcactttcactggaacgacgaaag
aaacttgtcaactgtttgccatctgatgaggaagatgcagaggatgcctgtgatgaaaca
atgttatcagacgacgagagcccagagaaagaatcaaacattcagaagagaaagaacagt
ggaggcagatctagaaatgacacaagtgatgagaaagatgatgatgatgaagttacagga
aggaagtacaaaagcaaacggcctagaaggaaagctaccgcaaagaacaatagagtgaag
aaaagacgcattatagagtcaggttcagaagactcagcagatgattacaagcctgacaga
gatgatgatgatgatgatgagagctgtagtagtggagttgatgaaaatgagttagaggag
gacagtccttctgaagaggacattgatgatattgcagaaatgccctctcgtaaacgtaaa
agaggcagcacttctactacacatcagaagaaaacaaagagtagtgcaccttcaactccc
tgtacacctgtggtcagcaagcaagctgtaccaagtactccatcaccttcagttctgtca
ggatctttagcaaaaaagatgtcaagttctgctagtaaagcggcagtgtctcttgcaaga
tttcagatgaattcctcgccagttccaaaggcaagtgcagctgatggagctggagtggga
acatacactcatcagagactggaatggttaaaggaagacaggagaaaagataaacatgga
aggccaatggcacatccagagtatgactcaaggacgttgctggttccgtcgtcctttctc
aactccaaagatgttacacctgccatgaagcaatggtggcagctgaagagtgacaatttt
gataccatccttttctttaaggttggcaaattctatgaattgtacaacatggatgccaca
gttggtgtgaaagaacttggattaatctatatgaagggtaattttgcgcatgctggtttt
cctgaaattgcttttgggcgatactctgacacgctgattcagaaaggctacaaggtggca
caagtggagcaaacagaaactccagaaatgatgaaggaaagatgcaagaagactcactca
aattctaagagtgatcaagtggtgagaagggaaatatgtgctgtgatcacaaaaggaaca
aagacgtacagctttgtcgatggggactgtacagacagtgatgcggcatatcttttagct
attgccgaaaagggttctgatgacgtttctggtggagaaagtgtctatggtgtttgcttt
gtggacacatccattggaaagtttcatatcggacagttcaaagacgatcgtcagtcatct
cgattgaggactctggtagctcattttacgcctgtccaggttttgtgtcctcgtggagga
ttaacactaaaaacccaacaagttctcaaccatgaattgatgtctgccatgaaggaatac
ttaacacaaggatcacagttttgggaagcaggcaagacgctgaaagttcttgccgaggag
cagtatttcagtgaagacaagaatggcactgaaaatccagtgaagagttggccagaagtt
ttaaagaagttaactgatggagatcttctgggtttaatgcccggtgaaggcagtgaattg
gctttgagtgctcttggtgcggttgtttggtacctgaagaaatgcctgatagatggagag
gtcttatcaatggggaattttgaggagtacctgccgctggacaattctcctgctcgtgga
cagaactcaagttttgcaaaaggaagacagcacatgatcctggataacatcactctaaca
aacctggatattattccatctgggcctgatgcctcactcgagggaaccttgctggagaga
ctggatcactgttgtactccgtttggtaaacgtctattcaagcaatggctttgtgcacct
ctctgcaacccggcctctatcaatgacagactcaattctgtagaagatttgatggctaac
ccaagtttagtggctgaaacaaaagatgtgttgaaggcactgccagatctggaaagactc
ttaaaaaaaatccacgcgctgagtttgcctcgagataagaatcacccagccaacagagcc
attctttataatgaggacacatacagtaagcgaaaaataaatgattttctcaccatattg
gagggttttgataaagcgacagagattgcagctatgttcaaagaccatgccagttctttc
aggtccaagcttctcactcaagttgtcacagaaaagggcatcaccgctggacaatcgaaa
gttcgtgggcagtttccaaaattgcacgatctcttacacgccttcaagcactcgtttgat
cacaacaaggctaagaatgaaggtgttatattgcctaaggcaggggtcgatccagattat
gaccaagccttagcagatatccagtccacgcgcacctggtttgaacaatacttaaagaaa
caatgcgctatattgggctgtaaggctacgtattggggctcagctaagaaccgttaccag
attgaaatccctgactccgtccgtaagattcccgacgaatacactctacagtcgcagaag
aaaggatttaaacgatactggacagcagccattgaagagaagctggcggggttggtggaa
gccgaggagagacgagaagaagctctgaaagacactatgagacttgtgtttcacaaattt
gatcaagagtataagacgtgggataaaacggttcagtgtctggctgtgttggactcactg
atgagtctcgcatcatgcagttcgcaggctgacggttcgatgtgtagacctgaaatcgtt
cttcccgagcagactgctgatgaagaatttcagcctttcttggaaatcagagaaggacgg
cacccatgcatttcacgcacattcagtggcggcgattttatcccaaatgacacagtggtc
ggaatgcaagatgagaatgacggcgaggagagagcagtcaacagccaaagcacatgcgtg
ttggttactgggcctaatatgggcggcaagtcaacgctgatgagacaagctggactgatc
gttatcatggctcagatgggctgttacgttccggctgagaattgccgcctcactcctgtg
gatcgtgtgtttacgcggcttggagctcacgacagaatcttatcgggtgagagtactttc
tttgtcgaactgagcgagacttcaaccattctccgacatgctacacgacactccctcgtt
ctggtggatgaacttggtcgtggcactgcgacatacgacggtacagccatcgcttgtgca
gtcgtcggtgagctttcaggtcacattaaatgcaggacactgttctctacacactatcat
tcattggtcgaggagttctccgctgacccgaatgttcggcttggtcatatggcctgcatg
gttgaaaatgaagatgagactgatccaagtaaagagacaataacattcctgtacaaattc
gtgaaaggcgcctgtccgaagagttacggatttaacgcagcaaggctagctgggatacca
gatgaggtaatttctgtggctgtaaataaagcgcgacaatttgaggagactgtagatcgc
gtcaaatttttcaggtcgctgcttaattgcaagaaagaagatataaaacagctacagaag
caaataatgggttattag
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integrated database retrieval system
