Shewanella pealeana: Spea_0580
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Entry
Spea_0580 CDS
T00606
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
spl
Shewanella pealeana
Pathway
spl00052
Galactose metabolism
spl00511
Other glycan degradation
spl00600
Sphingolipid metabolism
spl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Spea_0580
09103 Lipid metabolism
00600 Sphingolipid metabolism
Spea_0580
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Spea_0580
Enzymes [BR:
spl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Spea_0580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
BetaGal_ABD2
PH_TFIIH
Motif
Other DBs
NCBI-ProteinID:
ABV85908
UniProt:
A8H021
LinkDB
All DBs
Position
complement(709947..713180)
Genome browser
AA seq
1077 aa
AA seq
DB search
MKSHALMNTRQLTSKNVTSCRLIASVVALLVCPLSFASDAPLRWQNHQIFEQNKQPPHAS
FFGYSSQEKALTDEYRDSENFFDLNGRWQFHYANNPSSAPKDFAQVEANLADWQSIQVPG
NWETQGFGHAIYLDERYPFSTTWPDAPEDHNPTGSYRREINLPQSWQDKQVFLHIGAARS
ALTAFVNGQEVGYSQGAKTPAEFDITPYLNQEQNLLALQIIRWSDASYLESQDMLRVSGI
ERDVYLYATEKQRISDIDAQYQMSANLDKAEVALKLKLENHAKAKDVSLSYRLLSPQGVE
VSRGEQKIAKLAKQDTRQFDFPLNSPMLWSAETPNLYQLIVSLNDNQGELLQASSQHLGF
RRVEINNGQLLVNNKAITIRGVDRHETDPDTGHVVSRASMETDIRLMKQNNINAVRSSHY
PNDPYWLSLTDKYGLYVIDEANIESHPLAIDKNTQLGNEMSWLPAHQARVERMVERDKNH
PSIIIWSLGNEAGEGKLFAALYDWIKQRDPSRPVQYEPAGQHAYTDIVAPMYPSIERIEK
YAKEHQDRPLIMIEYAHAMGNSVGNLQDYWDVIEQYPQLQGGFIWDWVDQSLAFTNENGQ
RYWAYGKDYHPDMPTDGNFLNNGLVDPDRNPHPHLSEVKKVYQPLKLTELTRNQQDVTFT
LSNRYDFIDTLGLNLIWTLQQDGRPVAEGLVAMPQVKADTSQVLNFTLPESAIKTMQQSP
QYEYQLLLEVKVDTPQPMLPSDHLIAFEQFALQSAKPVTAKTIDAIKETRDSWILGKNNA
QYLFNKDTGWLTDIRVEGESQLKSPLIANFWRAPTDNDLGNQMPKWAGMWQDAGQELELV
SITRSKGQHAALKVTHQHPKLGFTLTSSYRVSDQAKLLVSSDFTPGDGELADLPRFGFSA
RLPFEVRFMHYFGRGPEETYTDRKTGNPVAWYALPIEQTFHRYSRPQETGQRTDVRYVAV
TNNKGAGLLAQTTMNSEMLQTSLWPFAQADIDFRDGDAEGSASGLVPVTANHGAEIPIRD
FVTWNIDYKQMGVGGDTSWGRPVHAPYRIAPKAMSFSFSLEPISANTDIKKQARGLQ
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtcatgccctgatgaatacccgacaattaaccagcaaaaatgtaacctcctgc
cgccttatcgccagtgtagttgcccttttagtctgccctctgagctttgctagtgatgcg
cctctaagatggcagaaccaccaaatcttcgagcagaacaagcagccaccccatgcgagc
ttctttggctattccagccaagaaaaagccctcactgatgagtatagagacagtgaaaac
ttcttcgatcttaacggtcgctggcagtttcattatgcgaacaatccatcgagcgcccca
aaggattttgcgcaagtagaggccaaccttgctgactggcagagcattcaagttcccggc
aattgggaaacacaaggttttggccacgccatctatttagatgagcgctacccatttagc
accacctggcccgatgcccctgaagatcacaacccgacgggtagttaccgccgtgagata
aatctgccgcagagttggcaagacaagcaggtatttctgcacattggcgccgcacgctcg
gcgctgaccgccttcgttaatggccaggaggtcggttatagtcagggcgctaagacccct
gcagaatttgatattaccccttatctaaatcaagaacagaatctactggccttacagatt
attcgctggagtgatgccagttatttagaaagccaagacatgcttagggtcagtggcatc
gagcgcgatgtctatctgtatgctactgagaaacagcgtattagcgatatcgacgcccaa
tatcagatgtcggcaaacttagataaggctgaagttgcacttaaactgaagttagaaaac
catgccaaagctaaagatgtgagccttagctatcgactgctatcgcctcaaggtgtagag
gttagccgcggtgaacagaaaatagctaaactggcaaagcaagatacacggcagttcgat
tttcctctcaattctcctatgctttggagcgcagaaactcccaacctctatcaactaatt
gtcagccttaacgataaccaaggtgaattgctacaagccagtagccaacatttgggcttt
cgccgagtcgagattaacaatggtcaactactggtcaataacaaggcgatcaccattcgt
ggcgtcgacaggcacgaaaccgatcccgatacaggccacgttgtcagtcgagccagtatg
gaaactgatatccgcctgatgaagcagaacaatatcaatgcggtgcgctcgagccattat
cccaatgatccttactggctgagcctcaccgataagtatggtctgtatgtaattgatgaa
gccaatatcgaatcacatccgctagctatcgataaaaatacccagcttggtaatgagatg
agctggttgccagcccatcaagcgcgagtcgaacgtatggtcgagcgcgataagaatcac
ccctctatcatcatctggtctctgggcaacgaagccggagaaggtaaactctttgccgcg
ctctatgattggattaagcagcgcgacccgagtcgccctgtacagtatgagcctgccggt
caacatgcttataccgatatcgtcgcccctatgtatccgtccattgagcgcatcgaaaag
tacgccaaagagcatcaggataggccacttattatgattgagtacgcccatgccatgggc
aactcggtcggtaatctgcaagattactgggatgtcatcgaacaataccctcagcttcaa
ggcggctttatttgggactgggtcgaccaatccctcgcctttaccaatgaaaatggtcag
cgctattgggcctacggtaaagactatcatcctgatatgcctaccgatggtaactttcta
aataatggtttagtggatcccgatagaaacccgcacccacatctatctgaggtgaagaag
gtttatcagccgctcaagctaactgaactaacccgaaaccagcaagatgtgacgtttacc
ttaagcaaccgctatgactttatcgacaccttagggctaaacctaatatggacattgcaa
caagacggacgtccggttgccgaaggcttggtcgcgatgccacaagtaaaggcggataca
agccaagtgctcaactttaccttgcctgagtctgcgattaagactatgcagcaaagcccg
caatatgagtatcaactgctattagaggtcaaggtcgatacccctcagcctatgttacca
agcgatcacctaatagccttcgagcaattcgccctgcaatcagctaagcctgtaacggca
aagaccatcgatgcgataaaggagacccgtgatagctggatattagggaaaaataacgcc
cagtatctgttcaacaaagacacaggctggttaactgacattcgagtcgaaggagagtct
caactcaagagcccgttaatagccaacttttggcgcgcccctaccgataacgacttaggt
aaccagatgcctaagtgggcaggtatgtggcaagacgcagggcaagaacttgaactcgtc
tccatcactcgcagcaaaggccagcatgcggcgcttaaggttacccaccagcaccctaag
cttggctttacgcttacctcctcttatcgagtgagcgatcaggccaaactgttagtcagc
agtgactttacccctggagatggtgaacttgccgatcttccccgcttcggtttttctgca
aggctccctttcgaggtgcgctttatgcactactttggccgcggccccgaagagacctat
accgatagaaaaaccggcaatcctgttgcctggtatgccctgccgatagagcaaaccttc
catcgctattcacgcccgcaggaaactgggcaacgcaccgatgtacgctatgtcgccgta
accaataacaagggagcaggcctacttgcgcaaaccaccatgaacagtgaaatgctgcaa
acgagtctgtggccatttgctcaagcagatatcgactttagggacggcgatgccgaaggt
tcagcatcagggctagtaccagtgacagcgaaccatggcgccgagatcccaatccgagat
tttgtcacctggaatatcgattacaaacagatgggcgtcggcggtgatacctcatggggg
cgtcctgtacacgcaccctatcgtatcgcaccaaaagcgatgagcttcagctttagccta
gagcccatttcagctaacacagatataaaaaagcaggctagaggcctgcaatag
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