Shewanella pealeana: Spea_3056
Help
Entry
Spea_3056 CDS
T00606
Name
(GenBank) diguanylate cyclase/phosphodiesterase
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
spl
Shewanella pealeana
Brite
Enzymes [BR:
spl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Spea_3056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
WS_DGAT_cat
FAM186A-B_N
Motif
Other DBs
NCBI-ProteinID:
ABV88373
UniProt:
A8H736
LinkDB
All DBs
Position
3749052..3751091
Genome browser
AA seq
679 aa
AA seq
DB search
MDSFKSLTWKQTILVVSSTLFFAVVIFFIEISLLVIDARQELSESQQELVDSVEQPATNA
IWALDDLRAEQTIQGILKVEHVGSAILKLEDGSRFVSVNNGAPSVNPELFTSISAKLFGD
LKQISRSLYRPFYTDANGNKELIGSLTVFYYTQELTSSLFSSLRFSLWATLARAFLLTLV
LSIVFHRFLTQPIAKISEAIDRIDPESPANHLLPPDRAHNDDELGAVISKLNQILIQFDT
TQTKLRKMATRDPLTELPNRTLLLETIAVTIQRAKTKQRRFSLLFIDLDRFKNVNDSLGH
EVGDQFLIRVARNLELTVGQIGTVARLGGDEFVVLADGLDSPTKAVELVDKLLVQLNTPM
QLNEHTVHPAASIGIAIYPDDGLRAEDLIRHADIAMYSAKAAGSNQWAFFKPQMTERASV
RLRTEASLHDALENNEFILHFQPKLDIETGAVVGCEALIRWQKDGRLISPASFIPVAEET
GMIIQIGQWVVEQSCKTIKDWKTRYNFSVPIAINVSSQQFLDASLVPDIKQAALRYQVAP
QSLEIEITETSLMNDIESAIIKLQQLKSAGFGIAVDDFGTGYSSLSYLRRLPISTMKIDR
GFVSDLPEESAIASTILMLGKQLDLNIVAEGVENEQQLAWLQNQGCQIGQGFYFSKPLPI
ESFEAKYIAPNRNTIKTSS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggacagtttcaaatcactgacatggaagcagactatcttagtggtttcttccacactt
tttttcgccgttgtgatcttttttattgagatatctctcctcgttatcgatgctcgccaa
gagctttcggaaagccaacaagaactcgtcgactcagttgaacagccagcgaccaatgcg
atctgggcattagatgatttacgtgctgaacaaaccattcaagggatcttaaaagtagag
catgtaggctcggcgatattaaaacttgaagatggtagccgtttcgtatcagttaataat
ggtgccccatccgttaatcctgagctttttacctcaatcagtgccaaactctttggcgac
ctaaaacagatctctcgctcgctgtaccgccctttttataccgatgctaatggtaataaa
gaacttatcggcagcctaaccgttttctattacactcaagagctaaccagctctttattt
tctagccttagattcagcctttgggcaactcttgcgagagccttcctgctaacgcttgtt
ctgtctattgtgttccatcgttttcttacccagccgatagcgaaaataagcgaagctatc
gacagaatcgatcccgaatcccctgcgaatcacttgcttccacctgaccgtgctcataat
gatgacgaactcggggcggttatctccaagctcaatcagatcttgattcaattcgacacg
actcagactaagctacgcaagatggcgacacgggaccccctgactgaattgcctaatcgc
actttattgcttgaaactattgcggttaccatccaaagagcaaagaccaaacagagacgt
ttcagcttgctgttcattgacctagaccgttttaaaaacgttaacgattcattgggacat
gaagttggcgaccaatttttaatacgagtcgcgcgtaacctagagttaaccgttggccag
ataggtacggtcgcaaggcttggaggcgatgaatttgtggtattagcggatggtttagac
tcccccacaaaagcggtcgagttggtcgataagttactggttcaactgaacacgcctatg
caactcaatgagcatactgtgcaccctgcagcctcaatcggtatcgcaatctatcccgat
gacggccttcgagccgaagaccttattcgccatgccgatatcgccatgtacagcgcaaaa
gccgctggctcaaaccaatgggcattctttaaacctcaaatgaccgaacgtgcttcagta
cgtttaagaactgaggcttcgttacatgatgcgcttgagaacaatgaattcatattacat
tttcagccaaaactagatatagaaaccggtgcagtggttggttgcgaagcccttatccgc
tggcaaaaggatggccgtttaataagtccagcctcttttattcctgtggcggaagaaact
ggtatgattattcaaataggccaatgggttgtcgagcaaagttgcaaaaccatcaaagac
tggaaaactcgctataacttttcggtgccaattgccattaatgtctcatcacagcagttt
ttagatgccagcctagtccccgatataaaacaggcggcactgcgttatcaagtagctcct
caatcactggaaatagagatcactgaaacttctctgatgaatgacatagagtccgcaatt
ataaagcttcaacagttaaagtccgcaggttttggcattgctgtagacgattttggtaca
ggttattcttctctttcttacctacggcgtctgccaataagcaccatgaagattgatcgt
ggttttgtatctgatctgcctgaagagagtgcaatcgcatcgactattttaatgcttggc
aagcaacttgatttaaacattgtcgccgagggagttgagaatgagcagcagcttgcttgg
ttacaaaaccaaggctgtcagataggacaagggttttactttagtaagcctctaccaata
gaatcgtttgaagccaagtacattgctccaaatcgtaacaccataaaaaccagcagctag
DBGET
integrated database retrieval system
