Sulfuriferula plumbiphila: SFPGR_20050
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Entry
SFPGR_20050 CDS
T06621
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
splb
Sulfuriferula plumbiphila
Pathway
splb00540
Lipopolysaccharide biosynthesis
splb01100
Metabolic pathways
splb01250
Biosynthesis of nucleotide sugars
Module
splb_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SFPGR_20050 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
splb01005
]
SFPGR_20050 (hldD)
Enzymes [BR:
splb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
SFPGR_20050 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
splb01005
]
Core region
SFPGR_20050 (hldD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
BBP04583
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Position
complement(1946572..1947573)
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AA seq
333 aa
AA seq
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MYYIVTGAAGFIGANLVKGLNERGITDIIAVDNLAKADKFRNLTDCEIADYLDKHEFLEL
IHSDALDGEVAAVFHEGACSDTMETDGRYMMENNYRYSLDLLNFCQENNTAFLYASSASV
YGAGSVFSEQRAHESPLNVYGYSKFLFDQAVRRMWHDKTAQIAGFRYFNVYGPREQHKGR
MASVAFHFFNQYSTHGKVKLFEGCDGYANGEQRRDFVSIEDVVKVNLWFLDHPGQSGIFN
LGTGRSQTFNDVAVAVINTCRAHAGEPPLDLATLQARGIIEYMDFPAALKGKYQSFTQAD
ISALRQAGYDAPLLSVEQGTARYVEVLRAAHTG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtattacatcgttactggcgcagcgggtttcattggcgcaaatctggtcaaggggctc
aacgagcgtggcattaccgacattatcgcagtggacaacctcgccaaagccgacaaattc
aggaatctcaccgattgcgaaattgcggattacctggacaaacacgaatttctcgaactc
atccactcggatgcactggacggtgaggtggcggcggtgttccacgagggcgcgtgttcc
gacaccatggaaaccgacggccgctacatgatggaaaacaactaccgctactccctggat
ctgctcaatttttgccaggaaaacaacaccgctttcctgtatgcctcatccgcttcggtg
tacggcgcgggcagcgtgttcagcgaacagcgcgcgcacgagtcgccgctcaatgtctac
ggctattccaagttcctgttcgaccaggcggtgcgccgcatgtggcacgacaagaccgcg
cagatcgccggtttccgctatttcaacgtgtacggcccgcgcgagcagcacaagggacgc
atggcctcggtggcgttccatttcttcaaccagtacagcacccacggcaaggtgaagctg
ttcgaaggctgcgacggctatgccaacggcgaacagcgccgcgactttgtttccatcgaa
gacgtcgtcaaggtcaacctgtggttcctcgaccatcccgggcaatccggcattttcaac
cttggcaccggtcgcagccagaccttcaacgatgtcgcggtagcagtcatcaacacctgc
cgtgcccatgccggcgagccgccgctggatctggctacgctgcaagcccgcggcatcatt
gaatacatggattttcccgctgcgctcaagggcaaataccagagcttcacccaggccgat
atttccgccctgcgccaggccggctacgacgcaccgctgcttagcgtggaacagggtacg
gcacgctatgtggaggtgctgcgcgcggcgcacactggctga
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