Sphingomonas sp. LK11: AV944_11360
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Entry
AV944_11360 CDS
T04954
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00190
Oxidative phosphorylation
splk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AV944_11360
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AV944_11360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splk03019
]
AV944_11360
Enzymes [BR:
splk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AV944_11360
Messenger RNA biogenesis [BR:
splk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AV944_11360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
APX67637
LinkDB
All DBs
Position
complement(2463098..2465266)
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AA seq
722 aa
AA seq
DB search
MTRPAHIAQMSEPDDDHFATEPNGRYFNRELSWLAFNRRVLEEACNTAHPLLERLRFLSI
SGSNLDEFFMVRVAGLKGQQAQDVEQRSVDGLTPGQQLSGIVAEADRLMASQQEVWGDLR
NLLDEAGIFVLRRDAIDQEASTWLETHVREQIFPILTPQALDPAHPFPFIPNKGLSMIFD
LTRVSDKAPIRELVMIPSTMPRFVRLPGEGARYVSIETILRRFSGLLFPGYVVNGAATFR
VLRDSDIEIEEEAEDLVRYFANAIKRRRRGRVIRLELETGMPDELADVLRGELGGSDAII
TESGNLLGIGDLDMLVDEDRPDLKFPPYSPRFPERIREFAGDCFAAIKAKDIVVHHPYET
FEVVIAFLKQAAADPDVVAIKQTLYRAGKQSAIINALIAAAEAGKSVTAIVELKARFDEE
QNLYWASALERAGVQVVYGFIDWKTHAKVSMVVRREGSDFRTYCHFGTGNYHPITARIYT
DLSFFTADPLLGRDAAQMFNYITGYVEPVAMNRVSLSPRDLRHNLMALIDAEIAHARAGR
TGSLWAKVNSLVDPQVIEKLYEASGAGVEIDLIVRGICCLRPGVPGMSENIRVKSVIGRF
LEHSRIWAFGDGKALPHDAAKVFISSADWMPRNFDRRVEYMLPILNPTVHDQILDQVMVA
NLLDNEQSWELEPDGSYVRDQPGDQRPFNLHRYFMTNPSLSGRGAALDTSKAVPTLSLRR
QR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtcctgcccatatcgcgcaaatgtcagaacccgacgacgatcatttcgcgacg
gagccgaacgggcggtacttcaaccgcgagctgtcatggctggccttcaaccgccgcgtg
ctggaagaggcgtgcaatacggcgcacccgctgctggagcggctgcgcttcctgtcgatt
tcgggatcgaacctcgacgagttcttcatggtccgcgtggcgggcttgaagggccagcag
gcgcaggatgtcgaacagcggtcggtcgatggcctgacaccggggcagcagctgagcggc
atcgttgccgaggcggatcgccttatggccagccagcaggaggtctggggcgacctgcgt
aacctgctcgacgaggcgggtatcttcgttctgcgacgcgatgccatcgaccaggaggcg
agcacctggctggaaacgcatgtccgcgaacagattttcccgatactgaccccgcaggcg
ctcgatccggcgcacccgtttccgttcatccccaacaagggtctgtcgatgatcttcgac
ctgacccgcgtgtcggacaaggcgccgattcgcgagcttgtcatgattccgtcgaccatg
ccgcgcttcgtccgcctgccgggcgagggcgcccgctatgtctcgatcgagacgatcctg
cgtcgcttctccgggctgctgtttccggggtatgtcgtcaacggcgccgcgaccttccgc
gtgctgcgcgacagcgatatcgagatcgaggaagaggcggaggatctggtccgctacttc
gccaacgccatcaagcggcggcggcgcgggcgggtgatccggctggagctggagaccggc
atgcccgacgaactcgccgatgtgctgcgcggggaactgggcgggtccgacgcgatcatc
accgagagtggcaacctgctgggcatcggcgatctcgacatgctggtcgacgaggatcgg
ccggacctgaaattcccgccttattccccccgtttccccgagcgtatccgcgaattcgcg
ggcgattgctttgccgcgatcaaggccaaggacatcgtcgtccatcacccctatgaaacg
ttcgaggtggtgatcgccttcctgaaacaagcggccgcggatcccgatgtcgttgcgatc
aaacagacgctctaccgcgcgggcaagcagtcggcgatcatcaatgcgctgatcgcggcg
gccgaggcgggcaagtcggtgaccgcgatcgtcgagctgaaggcgcggttcgacgaagag
cagaatctgtactgggcctccgcgctggagcgggcgggggtgcaggtcgtctatgggttc
atcgactggaagacgcatgcgaaggtgtcgatggtcgtccggcgcgagggcagcgatttc
cgcacctactgccatttcggcacgggcaattatcatccgatcaccgcgcgcatctatacc
gatctgagcttcttcaccgccgaccctctgctggggcgcgatgcggcgcagatgttcaat
tacatcacgggctatgtcgaacccgtggccatgaaccgggtcagcctgtcgccgcgcgat
ctgcgccataatctgatggcgctgatcgatgccgagatcgcccatgcccgtgccggacgg
accggcagcctgtgggcgaaggtcaactcgctggtcgatccgcaggtcatcgagaagctc
tatgaggcgagcggcgcaggggtcgagatcgacctgatcgtacgcggcatctgctgcctg
cgccccggtgtgcctggcatgtcggagaatatccgggtgaagtcggtcatcggccgcttt
ctggagcatagccgtatctgggcgttcggcgacggcaaggcgctgccccatgacgcggcc
aaggttttcatctcctcggccgactggatgccgcgcaatttcgaccggcgggtcgaatat
atgctgccgatcctcaacccgaccgtccatgaccagatcctcgaccaggtgatggtcgcc
aatctgctcgacaacgaacagagctgggaactggagccggacggcagctatgtccgcgat
cagcccggcgatcagcgccccttcaacctgcatcggtatttcatgaccaatccctcgctt
tcggggcgcggtgccgcgctcgacaccagcaaggcggtgccgaccctgtcgctccggcgg
cagcgttga
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