Streptococcus pneumoniae SPN994038 (serotype 3): SPN994038_04500
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Entry
SPN994038_04500 CDS
T02630
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
spnm
Streptococcus pneumoniae SPN994038 (serotype 3)
Pathway
spnm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spnm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPN994038_04500 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spnm03021
]
SPN994038_04500 (rpoE)
03400 DNA repair and recombination proteins [BR:
spnm03400
]
SPN994038_04500 (rpoE)
Transcription machinery [BR:
spnm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPN994038_04500 (rpoE)
DNA repair and recombination proteins [BR:
spnm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPN994038_04500 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
CCP30186
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All DBs
Position
444926..445513
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AA seq
195 aa
AA seq
DB search
MELEVFAGQEKSELSMIEVARAILELRGRDHEMHFSDLVNEIQNYLGTSNSDIREALPLF
YTELNFDGSFISLGDNKWGLRSWYGVDEIDEEIIALEENDDDEVAPKAKKKRVNAFMDGD
SDAIDYNADDPEDEDAYEADPALSYDDENPDDEKNEVEAYDAEINEIAPDDLGEDVDLNE
DDDEFSDDDAETSEE
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttggaattagaagtatttgctgggcaagaaaaaagtgaactatctatgattgaggtagcg
cgtgctatcttggaacttcgtggtcgcgatcatgagatgcattttagcgatcttgtaaac
gaaattcaaaactaccttggaacatcaaacagcgatatccgcgaagctttgcctttgttc
tacacagagttgaactttgacggtagcttcatctcacttggggacaacaaatggggtctt
cgttcatggtatggtgtggacgaaatcgacgaagaaatcatcgctcttgaagaaaatgac
gacgatgaagtagcaccaaaagctaagaaaaaacgtgtcaatgcctttatggatggtgat
tcagatgccattgactacaatgcagatgatccagaagacgaagatgcatacgaagcagat
ccagctctttcatacgatgatgaaaatccagatgatgaaaaaaatgaagtggaagcttat
gatgcagaaatcaacgaaatcgctccagatgacttgggagaagatgtggatctcaacgaa
gacgacgacgagttttcagatgacgacgctgaaaccagcgaggaataa
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