Schizosaccharomyces pombe (fission yeast): SPACUNK4.06c
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Entry
SPACUNK4.06c CDS
T00076
Symbol
rpb7
Name
(RefSeq) DNA-directed RNA polymerase complex II subunit Rpb7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03020
RNA polymerase
spo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPACUNK4.06c (rpb7)
09124 Replication and repair
03420 Nucleotide excision repair
SPACUNK4.06c (rpb7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
SPACUNK4.06c (rpb7)
03019 Messenger RNA biogenesis [BR:
spo03019
]
SPACUNK4.06c (rpb7)
03400 DNA repair and recombination proteins [BR:
spo03400
]
SPACUNK4.06c (rpb7)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SPACUNK4.06c (rpb7)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPACUNK4.06c (rpb7)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SPACUNK4.06c (rpb7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
2542097
NCBI-ProteinID:
NP_001342741
PomBase:
SPACUNK4.06c
LinkDB
All DBs
Position
I:2902104..2903133
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AA seq
172 aa
AA seq
DB search
MPFFLKELSLTISLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKG
RVVPGQGFAEFEVKYRAVLWRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDM
KFDPTANPPNYSGEDQVIEKGSNVRLKIVGTRTDATEIFAIATMKEDYLGVL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttcctcaaagagctttcgttaacgatttctctgcatcccagttacttcggt
cctagaatgcaggactatttaaaggcaaaattgttggcggacgtggaaggcacatgctca
ggtcaatatggctatataatttgcgttttggacagtaatactatagatattgataaaggg
agggtagttcctgggcaagggtttgccgaatttgaggtaaagtatcgtgcagtgttatgg
agaccatttcgtggggaagtggtcgatgcaattgttacaacagtaaataaaatgggattc
ttcgcaaatataggaccattaaatgtctttgtctcatctcatttggtgcctccagatatg
aagtttgaccctactgcaaaccctcctaattattctggtgaggatcaagttattgaaaag
gggtcgaatgtcagacttaagattgtcggtacaaggactgatgcaaccgaaatttttgcc
attgcaacaatgaaagaggattatctaggcgttctttaa
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