Schizosaccharomyces pombe (fission yeast): SPBC12C2.08
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Entry
SPBC12C2.08 CDS
T00076
Symbol
dnm1
Name
(RefSeq) dynamin Dnm1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
SPBC12C2.08 (dnm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
SPBC12C2.08 (dnm1)
03029 Mitochondrial biogenesis [BR:
spo03029
]
SPBC12C2.08 (dnm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
SPBC12C2.08 (dnm1)
Enzymes [BR:
spo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
SPBC12C2.08 (dnm1)
Membrane trafficking [BR:
spo04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
SPBC12C2.08 (dnm1)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
SPBC12C2.08 (dnm1)
RhoA-dependent endocytosis
SPBC12C2.08 (dnm1)
Mitochondrial biogenesis [BR:
spo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
SPBC12C2.08 (dnm1)
Retention of mitochondria
SPBC12C2.08 (dnm1)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPBC12C2.08 (dnm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
Motif
Other DBs
NCBI-GeneID:
2540159
NCBI-ProteinID:
NP_596014
PomBase:
SPBC12C2.08
Ensembl:
SPBC12C2.08
UniProt:
Q09748
LinkDB
All DBs
Position
II:complement(2458816..2461775)
Genome browser
AA seq
781 aa
AA seq
DB search
MEQLIPLVNQLQDLVYNTIGSDFLDLPSIVVVGSQSCGKSSVLENIVGKDFLPRGTGIVT
RRPLILQLINLKRKTKNNHDEESTSDNNSEETSAAGETGSLEGIEEDSDEIEDYAEFLHI
PDTKFTDMNKVRAEIENETLRVAGANKGINKLPINLKIYSTRVLNLTLIDLPGLTKIPVG
DQPTDIEAQTRSLIMEYISRPNSIILAVSPANFDIVNSEGLKLARSVDPKGKRTIGVLTK
LDLMDQGTNAMDILSGRVYPLKLGFVATVNRSQSDIVSHKSMRDALQSERSFFEHHPAYR
TIKDRCGTPYLAKTLSNLLVSHIRERLPDIKARLSTLISQTQQQLNNYGDFKLSDQSQRG
IILLQAMNRFANTFIASIDGNSSNIPTKELSGGARLYSIFNNVFTTALNSIDPLQNLSTV
DIRTAILNSTGSRATLFLSEMAFDILVKPQLNLLAAPCHQCVELVYEELMKICHYSGDSD
ISHFPKLQTALVETVSDLLRENLTPTYSFVESLIAIQSAYINTNHPDFLGVQGAMAVVLS
RKEQNRLMLSQENDEPISSALDTVKPDGIELYSSDPDTSVKSITNKATNEITTLKSDDSA
KMQPLDVLASKRYNNAFSTETAERKTFLSYVFGANNATRKAMSIDKSSSYPLNDSLSGGD
TNHKNNHPLKMTDLSNEVETMALEDMSEREEVEVDLIKELITSYFNLTRKIIIDQVPKVI
MHLLVNASKDAIQNRLVSKLYREDFFDTLLIEDENVKSEREKCERLLSVYNQANKIISTV
F
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacttattccattggtgaatcaacttcaagaccttgtctacaacacaattggg
tcagattttttggatttaccatccatagtggtcgttgggtcccaatcttgtggaaaatct
tctgtattggaaaatattgttggtaaagattttttacctcgtggtaccggaattgtcact
agaagacccttgatactacaactcatcaacttgaagcgcaagaccaaaaataaccatgat
gaggaaagtacttctgacaacaattcagaagaaacaagtgctgctggggaaacaggcagt
cttgaaggaattgaagaagattctgatgaaattgaagattatgctgaatttttgcatatc
cccgataccaaatttaccgacatgaacaaagttcgcgcagagattgagaatgagactcta
cgggttgctggtgcaaacaaaggaattaacaaattgccaatcaatctaaaaatttattct
actcgcgttttgaacttaactttaattgatttgcctgggcttacaaaaattcccgttgga
gatcagcctactgatattgaggctcaaacacgctctcttattatggaatacatcagccgt
cccaattccattatacttgctgtatctcctgccaactttgacattgtcaacagtgagggc
ctaaaactagcgaggtctgttgatcccaagggtaagcgcactattggtgttcttaccaag
cttgaccttatggatcaaggtaccaatgcaatggacatattaagcggtcgcgtttatccc
cttaagctgggtttcgtagcaactgttaaccgttcccagtctgatattgtatctcacaaa
tccatgagagatgctttgcaatctgagcgctctttttttgaacatcatccggcatatcgt
accattaaagatcgttgtggaacaccctatcttgccaagacattgagtaatctattggta
tcacatatccgtgagcgccttcccgatatcaaagcccgccttagcactctaatatctcaa
actcaacaacaactaaacaattacggtgactttaaactttctgatcagagtcaacgtgga
attattttattgcaggcgatgaatcgctttgccaacacgttcattgctagtatagatgga
aattcttcaaatattcccacaaaagaactttcaggtggtgctcgtctttactccattttc
aataatgtatttactactgcattgaattcaatcgatcctttacaaaacttatcgacagtc
gacatacgtacagctatattgaatagcacaggctctagggctaccttgttcctttcggaa
atggctttcgatatattggtgaagccgcaattaaaccttttagcggcaccctgtcatcaa
tgtgtcgagcttgtttacgaagaattaatgaaaatatgtcattattctggtgactcagac
atatcgcattttcccaagttgcaaactgctctcgtagaaaccgttagcgatttactacga
gaaaatttaactcctacttattcttttgtagaaagcttgattgctattcaaagtgcatat
attaatacgaatcatccggatttcttaggggtgcagggtgcaatggctgtagtattgtca
agaaaagaacagaatcgcttaatgctttcccaagaaaatgatgaacccatttcttctgct
ttggacactgtgaagcctgacggaattgagttgtattcttcggatcccgacacttctgtt
aagagtattaccaataaagcgacgaacgagattacaactttgaagagcgatgattcagca
aaaatgcagcctttggatgttttggcttctaaacggtataataatgcctttagcactgaa
actgcggaaagaaaaacatttcttagctatgtctttggtgccaataatgcgactaggaaa
gcaatgagcattgataagtcttctagctatcctttaaatgattctctttctggaggagat
acaaatcacaaaaacaaccatcctttaaagatgacagatttatcaaatgaagttgaaaca
atggcgttggaggacatgagtgaaagggaagaagttgaagttgatcttattaaagagcta
attacttcttatttcaacttaactaggaagattataattgatcaggtaccaaaggtaatt
atgcatttgctcgtgaacgcctctaaagatgccattcaaaatcgtttggttagtaaatta
taccgagaggatttctttgacaccctccttattgaagatgagaacgtcaaaagtgaaaga
gaaaaatgtgagcgtcttttatctgtttacaaccaagcaaacaaaattatttcaacggtt
ttttaa
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