KEGG   Schizosaccharomyces pombe (fission yeast): SPCC1020.04c
Entry
SPCC1020.04c      CDS       T00076                                 
Symbol
rpb6
Name
(RefSeq) DNA-directed RNA polymerase subunit Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03020  RNA polymerase
spo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPCC1020.04c (rpb6)
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPCC1020.04c (rpb6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spo03021]
    SPCC1020.04c (rpb6)
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPCC1020.04c (rpb6)
Transcription machinery [BR:spo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     SPCC1020.04c (rpb6)
  RNA polymerase III system
   RNA polymerase III
     SPCC1020.04c (rpb6)
  RNA polymerase I system
   RNA polymerase I
     SPCC1020.04c (rpb6)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SPCC1020.04c (rpb6)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 2539083
NCBI-ProteinID: NP_587956
PomBase: SPCC1020.04c
Ensembl: SPCC1020.04c
UniProt: P36595
Structure
LinkDB
Position
III:783023..784077
AA seq 142 aa
MSDYEEDEAFGMDGAVMEEEVDELEMIDENGQSQQGVSHPGEPSTTVITEDVASSKTAQS
GKAVAKEDRTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQIAMKELAQKKI
PLLVRRYLPDGSYEDWSVAELI
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtctgactatgaagaggatgaggcctttggaatggacggtgctgttatggaggaggaa
gtcgatgaactggagatgatcgatgaaaatgggcaatcacagcaaggcgtctctcatcct
ggtgaaccttcgactaccgttattactgaagatgttgctagctcaaaaacagctcaatct
ggtaaagcggtagcaaaggaagaccgaaccactactccttatatgacaaagtatgaacgc
gctcgtattttgggaactcgagcacttcaaattagtatgaacgcacctgttttagttgat
ttggaaggtgaaactgatcctttgcaaattgccatgaaggagcttgcacaaaaaaagatt
cctctactagtccggcgatatttacccgatggcagttatgaagactggagtgtagcggag
ctcatttaa

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