Spongiibacter sp. IMCC21906: IMCC21906_02146
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Entry
IMCC21906_02146 CDS
T03945
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi00071
Fatty acid degradation
spoi00280
Valine, leucine and isoleucine degradation
spoi00310
Lysine degradation
spoi00362
Benzoate degradation
spoi00380
Tryptophan metabolism
spoi00410
beta-Alanine metabolism
spoi00640
Propanoate metabolism
spoi00650
Butanoate metabolism
spoi00907
Pinene, camphor and geraniol degradation
spoi00930
Caprolactam degradation
spoi01100
Metabolic pathways
spoi01110
Biosynthesis of secondary metabolites
spoi01120
Microbial metabolism in diverse environments
spoi01200
Carbon metabolism
spoi01212
Fatty acid metabolism
Module
spoi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IMCC21906_02146
00650 Butanoate metabolism
IMCC21906_02146
09103 Lipid metabolism
00071 Fatty acid degradation
IMCC21906_02146
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IMCC21906_02146
00310 Lysine degradation
IMCC21906_02146
00380 Tryptophan metabolism
IMCC21906_02146
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IMCC21906_02146
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IMCC21906_02146
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IMCC21906_02146
00930 Caprolactam degradation
IMCC21906_02146
Enzymes [BR:
spoi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IMCC21906_02146
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IMCC21906_02146
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IMCC21906_02146
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
IMCC21906_02146
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AKH69813
UniProt:
A0A0F7M6J8
LinkDB
All DBs
Position
complement(2302509..2304656)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYQGKALRASFLDDGIAELCFDLQGDSVNKFNRLTLQELDEATQALAEEPSLKGVVVSS
AKPVFIVGADITEFSETFKLSDPELREWASHANGIFNRFEDLPVPTVVAINGIALGGGFE
MCLACDYRVMSSAAVVGLPEVKLGINPGFGGTVRLPRLIGCDNAMMWVATGDQKKPDAAL
KDGGVDAVVAPELLHEAAVDLLKGCIAGEFDYQARRDEKKSPVKLNDIERMMSFTTGKAM
IAQQAGKNMPAPITAAKSMERNATFGRDDAIEVEIDHFIKLVRTPQSNALIGIFLNDQAV
NKTAKSFAKSGGDVNQAAVLGAGIMGGGIAYQSAYKGTPILMKDIAEEGLNLGMKEAGKL
LSKRVSRGRMTPDKMATVLGSIRPTLDYTGFDKVDVVVEAVVENPKVKHAVLAETEKHIR
KDAVLASNTSTISISYLAQPLDRPENFCGMHFFNPVHAMPLVEVIRGEKTSEDTVAKVVK
YALKMGKTPIVVNDCPGFFVNRVLFPYFAGFNMLVRDGVDFRRIDKVMERFGMPMGPAYL
MDVVGIDTGKHAADVMAEGFPDRMQHDFKGISDLMYEAKRYGQKNGLGFYAYQEDAKGKP
RKTEDETALKMAADAAEAHVEVSDEDILARMMLPMCIETVRCLDEGIVSSAADADMGLVM
GIGFPVFRGGAIRYIDQMGVAAFCDMADCYADLGGLYQATESLRTMASNNSSFFS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaaggcgctacgcgcatcgtttttagacgatggaatcgccgaactc
tgttttgaccttcaaggcgactctgttaataaatttaatcgactcacgttacaagagctg
gacgaggcgactcaggccttggcggaagagcccagtttaaaaggcgtggtggtcagcagc
gccaaacccgtttttattgtcggtgctgatatcactgaatttagtgaaaccttcaagctc
agtgatcccgaactgagagagtgggcttctcacgccaacggtatttttaatcgatttgaa
gatttgcctgtgcccaccgttgtggcaattaacggcattgctctcggtgggggttttgag
atgtgtctcgcctgtgattaccgggtcatgtcttctgccgccgtggtggggttgccggaa
gtgaagctaggcattaaccccggatttggtggcacagtacgcttgccgcgtttgatcggt
tgcgacaatgccatgatgtgggtggccactggcgatcagaaaaaaccggatgcagctctg
aaagacggcggcgtcgatgcggttgttgcccctgagttactacacgaagcggcggtagat
ttgctgaaaggctgtatagcaggggagtttgactatcaggctcgtcgtgacgaaaagaaa
agtccggttaagctcaacgacattgagcgaatgatgtcatttaccacgggcaaagcaatg
atcgctcaacaggctggcaagaacatgcccgcgccaattacggcagctaagtctatggag
cgtaatgcaacatttggccgtgatgatgccattgaggtggaaatagatcattttatcaag
ctggtgcgtacgccccagtccaatgccttgattggtattttcttgaacgatcaagcggtg
aataaaacggcaaaatcttttgctaagtctggcggtgatgttaatcaagctgcggtgctg
ggtgcgggaattatgggcggcggaattgcctatcaatcggcctataaaggcacgccgatt
ttgatgaaggacatcgccgaagagggcttaaatctgggcatgaaagaggctggcaagctg
ttgtccaagcgcgtctcaagagggcggatgacgcccgataaaatggcgacggtactgggg
agcattcggcccacattggactacaccggttttgataaagtcgatgtggttgtggaggca
gtggtcgaaaaccccaaagtgaagcacgcggttttagccgagaccgaaaagcatattcgc
aaagatgccgtgctggcatccaacacttctactatttctatcagctatctggcccaacca
cttgatagacctgaaaatttctgcgggatgcacttcttcaatccggtgcatgccatgccc
ttggttgaggtaattcgcggtgaaaaaaccagcgaagataccgttgctaaagttgttaaa
tatgctttgaaaatgggtaaaaccccaattgtggtcaatgattgccccggcttttttgtt
aaccgggtgctgtttccctattttgcgggcttcaatatgttggttcgagatggggtggat
ttccgccgtatcgataaagtcatggagcgttttggcatgcctatggggccagcgtatctt
atggatgtggtgggaattgataccggcaagcatgctgcagacgttatggcagaaggcttt
ccagatcgtatgcaacatgatttcaaaggtatttccgatctcatgtatgaggccaagcgt
tacggccagaaaaacggcttaggcttttatgcttatcaagaagatgccaaaggtaagccc
cgtaaaacagaagatgaaaccgcactgaaaatggcggcggatgccgctgaagctcacgta
gaagtcagcgacgaagatattctcgcgcgaatgatgctgcctatgtgtatcgaaacggtt
cgttgtctcgacgaaggcattgtcagctctgcggccgatgccgatatggggctggtgatg
gggattggcttcccggtgttcagaggcggagcgattcgctatatcgatcaaatgggcgtg
gctgcgttttgtgacatggcagattgctatgccgatttgggcggcctctatcaagccacc
gagagtttgcgaaccatggcttctaataacagcagcttttttagctga
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