Spiroplasma sp. NBRC 100390: S100390_v1c01680
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Entry
S100390_v1c01680 CDS
T05859
Symbol
rpoE
Name
(GenBank) DNA directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sprn
Spiroplasma sp. NBRC 100390
Pathway
sprn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
S100390_v1c01680 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sprn03021
]
S100390_v1c01680 (rpoE)
03400 DNA repair and recombination proteins [BR:
sprn03400
]
S100390_v1c01680 (rpoE)
Transcription machinery [BR:
sprn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
S100390_v1c01680 (rpoE)
DNA repair and recombination proteins [BR:
sprn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
S100390_v1c01680 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
APE12981
UniProt:
A0A1J0TZN2
LinkDB
All DBs
Position
192536..193078
Genome browser
AA seq
180 aa
AA seq
DB search
MNDSVELLELVYSCLKKKGGSDTFENIWNEIASQSDVTVHGTSKEDVIAELYTDLVLDNR
FVLTSEGMWGLREFLKYDDIKKQYDYTDQFETTEEFEDIDLDEEEEGEDEETLIDTLDFD
DTLDEDDNEEDNFVEIEVEDDDLISNDYSVDDDDETVAAKLGITEEIDWKALEKEMEENN
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatagtgtagaattattagagttagtgtattcatgtttaaagaaaaaaggtgga
agtgatacttttgaaaatatttgaaatgagattgcttcacaaagtgatgtaacagtacac
ggaacaagtaaggaagacgttattgcggaattatatactgatttagttttagataaccgt
tttgtcttaacaagcgaaggtatgtgggggttacgcgaatttttaaagtatgatgatatt
aaaaaacaatatgattatactgatcaatttgaaacaacagaagaatttgaagatattgat
ttagatgaagaggaagagggcgaagatgaggaaacattaattgacactcttgattttgat
gatactttagatgaagacgataatgaagaggataattttgttgaaattgaggttgaggat
gatgacctaatttctaatgattattctgttgatgatgacgatgaaacagtagcagctaaa
ttgggtattacagaagaaattgactgaaaagctcttgaaaaagaaatggaagaaaataat
taa
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