Staphylococcus shinii: JMB28_00885
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Entry
JMB28_00885 CDS
T08256
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00052
Galactose metabolism
spsd00511
Other glycan degradation
spsd00600
Sphingolipid metabolism
spsd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
JMB28_00885
09103 Lipid metabolism
00600 Sphingolipid metabolism
JMB28_00885
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
JMB28_00885
Enzymes [BR:
spsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
JMB28_00885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
BetaGal_gal-bd
Motif
Other DBs
NCBI-ProteinID:
QRA16808
LinkDB
All DBs
Position
185422..188406
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AA seq
994 aa
AA seq
DB search
MLEQQFHENLEIQHVNLLPRRAFYIPYQQGEAAYHFGTRYNTRNVTLLNGEWYFQYFESI
EAYLNHSNEQGIKTLTVPSVWNLYGYDQIQYLNTQYPIPFDPPYVPKDNPCGHYTRKFTI
DEYDQQYDYHLNFEGVDSAFYVWINNEFIGYSQIAHAISEFDISNFVQQGDNNIDVLVLK
YSDGTYFEDQDMFRHSGIFRDVYILKRATERVDDFKVQTNLSDDLNSAKIDVKIERAHNL
KSVEFQLYNPEGEEIATISGAQEYQFNVYKPQLWSTESPTLYTLYIVTDQEVIAQKVGIR
EVAIQNNQFYINGQSIKLRGTNYHDSHPETGYVMTESHLKKDLELMKQGNFNAIRTAHYP
KSPLFYEMTDQYGFYVMSEADIETHGVVRLYGEDNNEDFNIIADDSKFETAIIERIEASI
MPLKNYSSIVFWSLGNESGFGKNMVKGAARAKTLDNTRPIHYEGTLYRDKQQHYDLSNID
MISRMYPSPEEIEETYLKKPDLDKPFILCEYAHAMGNSPGDLHAYQELVEQYDSFIGGFV
WEWCDHAIQIGMKEGQPIFRYGGDFGEKLHDGNFCVDGIVFPSRVPHEGYYEFKQEHRPL
KLVSHDDFKIVLRNQMDFTSAEQYMFVEATVTNLNGGKTISEIPLSNFLPHTTQTIDLSD
YINIEHISDVILRYKLKDDDQFRHENFELGHDQIVYQRRTMKEQDEQSGEIDILVNETDK
LIKVVLGKSETYVFNKDNASLESVLKHNHIVINQSTTNNIWRAPTDNDTNIKCDWDYSGY
KDITTRVHDYQILESETEVSLIFNIAMVNDAVPPVLFGTVTWRVQHDGILNVTYELERDV
KAPYLPRFGLGLTLPKVFERVKYYGKGPFSSYQDKGVANYLDEFETTVTGNGEVHIRPQE
TGSHNETTFVEISDGCKRVIVTSDNTFSFNTTHYSLKQLTEITHKDALELEDQTYLYIDY
AQSGIGSNSCGPELNEAYRLNDRHIEFSFNLKFV
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgttagagcaacagtttcatgaaaatttagagattcaacatgttaatttattaccaaga
cgtgcattttatataccatatcaacaaggggaagcggcttatcattttggaacaagatat
aatactcgaaatgtgacattgttaaatggcgaatggtactttcaatactttgagtcaatc
gaagcatatctaaatcattcaaatgaacagggaatcaaaacactaacagtaccatcagtt
tggaatttatatggttatgatcaaatacaatatttaaatactcagtatccaatacctttt
gatccaccatatgtacctaaagataatccatgtggacactacacgcgaaaatttactatc
gatgaatatgatcaacaatacgattatcatttgaactttgaaggtgtagatagtgcattt
tatgtatggattaataatgaatttataggctatagtcaaattgcacatgctatttctgag
tttgatatttccaattttgttcaacaaggtgataataatatcgacgtgcttgtacttaaa
tattctgatggtacctattttgaagatcaggacatgtttcgacactcgggcatttttaga
gacgtttatattttaaaacgcgcaactgaacgtgttgatgattttaaagtgcaaacgaat
ctaagtgacgatttaaattctgcgaagatagatgtaaaaatagaacgggcgcacaattta
aaatcagtagaatttcaattatataaccctgagggtgaagagatagcaaccatatctgga
gcacaggaatatcaatttaatgtctataaacctcaattgtggtctacagaaagtccgact
ttatatacattatacattgtgacagatcaagaagtgattgcacaaaaagttggaattcgt
gaagtggctatccaaaataatcaattttatattaatggtcaatccatcaaactgcgtggg
acaaattaccatgatagtcatccagaaactggttacgtaatgacagaatcccatttaaaa
aaagacttagaattgatgaaacaaggaaactttaacgccattcgtacggcacattaccca
aaatctccactattttacgaaatgacggaccaatatggcttttatgtaatgagcgaggct
gatattgagacgcatggtgtcgttaggttatatggtgaagacaataatgaagattttaat
attatagctgacgatagtaaatttgaaacagctattatagaacgtattgaagcttctatt
atgccactgaaaaattacagctctatcgtattttggtcattaggaaatgagtcgggattt
ggtaagaatatggttaaaggtgcagcacgtgccaaaacactagacaacacaaggccaatt
cattacgaaggtacattatatcgagataagcaacaacactatgatttatctaatatagat
atgattagtagaatgtatccatcccctgaagaaattgaggagacttatttgaagaaaccg
gatttagataaaccgtttatcttatgtgaatatgcacatgcaatgggcaattctccagga
gatttacacgcgtatcaagaactagttgagcaatacgatagctttatcggaggatttgtt
tgggaatggtgcgatcacgctattcagattggaatgaaagaaggccaacctatttttaga
tatggtggcgactttggagaaaaactacatgacggtaatttctgtgtcgatggcattgtt
tttccaagtagggtgccccatgaaggttattatgaattcaaacaagaacataggccatta
aaacttgtgtcacacgatgattttaaaattgtgctacgtaaccaaatggattttacgtct
gcagagcaatatatgtttgtagaggctacagtgacaaatttgaatgggggaaaaacgatc
agtgaaatacctctttcaaatttcttgccacatactacgcaaacaattgatttgagcgat
tatatcaatatagaacatatcagtgatgtcatattacggtataaattaaaagatgatgat
caatttcgtcacgaaaattttgaattaggacatgatcaaatcgtatatcaacgtcgaaca
atgaaagaacaggatgagcaatcgggtgaaattgatattttagtaaatgaaactgataaa
ttaatcaaagttgtattaggtaaaagtgaaacgtatgtttttaataaagataatgcaagt
cttgagtcagttctcaagcataatcatatagtaattaaccaaagcacaacaaataatatt
tggagagctcccactgataatgatacgaatataaaatgtgattgggattactctggttat
aaagatatcactacacgcgtgcacgattatcaaattttagaaagcgagacagaggtcagt
cttatttttaatatagcgatggtcaatgacgcggtgccaccggtactatttggaacagtg
acttggcgtgttcaacatgatggaatacttaatgtaacttatgagttagaaagagatgtg
aaagcaccttatttaccacgatttggtttaggtttgactttacctaaagtatttgaacga
gtgaaatattatggaaaaggtcctttcagtagttaccaagataaaggtgtagccaattat
ttagatgagtttgagacgactgttacaggcaatggtgaagttcatatcagaccccaagaa
acaggaagtcataatgaaactacatttgttgaaattagtgatgggtgtaaaagggttatc
gtgacaagtgataatacatttagttttaatacaacacattattcattaaaacagctgacc
gaaataacccataaagatgcactagaacttgaagatcaaacctatttatatatcgattat
gcacaaagcggtataggttcaaatagttgtggaccagaattaaatgaagcatatcgatta
aatgatcgacacatcgagtttagctttaatttgaaatttgtctaa
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